KEGG   Verticillium alfalfae: VDBG_00465
Entry
VDBG_00465        CDS       T02227                                 
Name
(RefSeq) polyadenylate-binding protein
  KO
K14396  polyadenylate-binding protein 2
Organism
val  Verticillium alfalfae
Pathway
val03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    VDBG_00465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:val03019]
    VDBG_00465
Messenger RNA biogenesis [BR:val03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     VDBG_00465
SSDB
Motif
Pfam: RRM_1 DUF724 PRKG1_interact Nup35_RRM_2 ZapB RRM_occluded Mod_r V_ATPase_I
Other DBs
NCBI-GeneID: 9529057
NCBI-ProteinID: XP_003008784
UniProt: C9S619
AA seq 205 aa
MADVKPEIQPEELPVDVEQQDTPADNQQAAEDDGHDEEEISAMKRRVAEMEEEAAKLREM
QATLDTQTQDVSDNKEDIDSRSIFVGNVDYSASPEEIQAHFQSCGSINRVTILLDKFTGQ
PKGYAYVEFTEPSLVAQALVLNESVFKGRNIKVVPKRTNIPGMTRGRGRGGMRGGRGGFG
GRGGFNPRGYRGGYRGRGGRGFTPY
NT seq 618 nt   +upstreamnt  +downstreamnt
atggccgacgtcaagcccgagatccagcccgaagagctgcccgtcgatgttgagcaacaa
gacaccccggcggacaaccagcaggctgctgaggatgatggtcacgatgaggaagaaatc
tcggccatgaagcgccgtgttgccgagatggaagaggaggctgccaagctgcgagagatg
caggctactctggatacccagacccaggacgtctcggataacaaggaggatattgacagt
cgcagtatcttcgtcggcaacgtcgactattcggcctcgcccgaggagatccaggctcac
ttccagagctgcgggtccatcaaccgagtcacgattctgctcgacaagttcaccggccag
cccaagggatacgcctatgttgagtttaccgaacccagcctcgttgcccaggctctcgtt
cttaacgagagcgtattcaagggccgcaacatcaaggtcgtccccaagcgcaccaacatc
cccggcatgacccgtggacgcggtcggggtggtatgcgcggcggccgcggcggcttcggt
ggccggggtggcttcaacccgcggggctacagaggcggataccgcggacgcggcggcaga
ggatttaccccgtactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (24)   

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