KEGG   Verticillium alfalfae: VDBG_02238
Entry
VDBG_02238        CDS       T02227                                 
Name
(RefSeq) pectate lyase Pel-34K
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
val  Verticillium alfalfae
Pathway
val00040  Pentose and glucuronate interconversions
val01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:val00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    VDBG_02238
Enzymes [BR:val01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     VDBG_02238
SSDB
Motif
Pfam: Pectate_lyase_4 Beta_helix NosD Pectate_lyase_3
Other DBs
NCBI-GeneID: 9533901
NCBI-ProteinID: XP_003008050
UniProt: C9S9R6
AA seq 326 aa
MKYSAYLALIPSALASVVPRQDPCQASADGFASLNGGTTGGAGGTVVTVSTLADLEKYAA
AAGPHVIKVEGRIPVVPFGKEVSVSSDKTIVGVGEDAEIFQGGFRLIKVSNVIIRNLIIG
HSSDGTDNDYDGIQSDTSSNIWIDHCLFEEAGDGLVDLRKDTNYFTVSNNIFRKHDKAFG
IGWTENVVARGTIHHNWFDSTNQRNPSADNLAEAHLYNNLVSGVTSYGHYVRGATTAVIE
NVFFEDTKNPITRDEGAALRTKGNIFEGTGGTIAKDAGEAFDPASYYSYTLTKTADVPAF
EKNQEKPGPPYEGMLVAEDIMPRMWQ
NT seq 981 nt   +upstreamnt  +downstreamnt
atgaagtattccgcttacctcgccctcattccctcggcgcttgcctcggtggttccccgc
caggatccttgccaggcttcagccgacggcttcgcatctctcaacggtggcaccactggc
ggtgccggcgggacggtcgtcacggtctcaacgctggccgatctcgaaaagtatgcagcc
gccgcaggccctcatgtaatcaaagtcgagggccgtatccctgttgtgcccttcggcaag
gaagtcagcgtttcaagcgacaagacgattgtcggcgttggagaggacgcagagatcttc
caaggcggcttcagactgataaaagtcagcaatgtgattatccgaaacttgatcatcggc
cactccagcgacggcaccgacaacgattacgatggaatccagtcagacacatcatcgaat
atctggattgatcattgcctttttgaagaagccggcgacggtctcgtcgacctccgcaaa
gatacaaactactttaccgtctcgaacaacatttttcgcaaacatgacaaggccttcggc
atcgggtggacagaaaacgtcgtcgctcgtggcactattcaccacaactggtttgactcg
acgaaccagcgcaacccttcagctgacaacttggctgaggcacacttgtacaacaacttg
gtcagtggtgtgacttcgtacgggcactacgttcgtggtgccacgacggctgttattgag
aatgtgttctttgaggatacgaagaatccaattacgcgggatgaaggagcggcgctccgc
acgaaggggaatatcttcgagggcactggcgggacgattgcgaaggatgctggagaagcc
tttgacccggcttcgtactactcgtacacgttaacgaagacggcggacgtaccggccttt
gagaagaaccaagagaaacccggtccgccgtacgagggcatgctcgtagccgaggatatc
atgcccagaatgtggcagtag

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