KEGG   Verticillium alfalfae: VDBG_02956
Entry
VDBG_02956        CDS       T02227                                 
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
val  Verticillium alfalfae
Pathway
val03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    VDBG_02956
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:val01009]
    VDBG_02956
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:val03400]
    VDBG_02956
Enzymes [BR:val01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     VDBG_02956
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     VDBG_02956
Protein phosphatases and associated proteins [BR:val01009]
 HAD phosphatases
  Other HAD phosphatases
   VDBG_02956
DNA repair and recombination proteins [BR:val03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     VDBG_02956
SSDB
Motif
Pfam: PNK3P AAA_33 Rad17 RsgA_GTPase AAA_29
Other DBs
NCBI-GeneID: 9532960
NCBI-ProteinID: XP_003006817
UniProt: C9SCN2
AA seq 477 aa
MSSSSKRKPSDAPVSPPPLKRKLASGTTKGAVANFFTPTSQKPKDRTAWSERAPNNDTPA
TLLVAKYEPEAKEETSTNKRRKVAAFDLDSTLIATSSGKKHASDGNDWKWWHPSVPARLK
QLYNDENYRLIILSNQAGLTLHPDPKSKTPKANAAKRVSDFKTKCAAVLAQLDLPVTLYA
ATAKDMFRKPRPGMWHELCRDHDITEDVDLASSLFVGDAGGRVAAGATARDFSCSDRNLA
HNIGVPFKTPEEFFLDEPPRVFAREFDLALHPYVEAAGTDKGEGADEAPLFEKKNKQDVV
LFCGPPGAGKSTFYWRQLQPLGYERVNQDILKTRDKCVKTARELLQGGKSVAIGTSRPMA
RDEKQCVADKTCPPDNTNADPDTRAVWVNLAKQHDVPVRCVWFKTPLFVCEHNDVVRALN
TKMNPESRTALPQLAFNGFKSRFREPKAKEGFQDVTELEFKFRGTREEHGVWARYWI
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgtcctcctcgtccaagcgcaagccctccgatgcaccagtatcaccaccccctctcaag
aggaagctcgcttccggcaccacaaagggcgcggtcgccaacttcttcaccccaacatcc
cagaaacccaaggaccgcaccgcctggtcagagcgcgccccgaacaacgacacgccagca
accttgctcgttgccaagtacgaacctgaagccaaagaagagacttcgacaaacaagagg
cggaaagtggccgcctttgatcttgactcgaccctcatcgcgacatcttcaggcaagaag
cacgcctccgacggcaatgattggaaatggtggcacccctctgtgccggcccgcctcaaa
caactctacaacgatgaaaactaccgcctcatcatcctctccaaccaagccggcctgacc
ctacacccggaccccaaatccaaaacccccaaagcaaacgccgccaagcgcgtctccgac
ttcaagacgaaatgcgccgccgtcctcgcccagctcgacctgcccgtcaccctctacgcc
gccacggcaaaggacatgttccgcaagccccgccccggcatgtggcacgagctctgccgc
gatcacgacatcacggaggacgtcgaccttgcgagcagcctcttcgtaggcgacgccggc
gggcgtgtcgctgccggtgcgacagcccgcgacttcagctgctcggaccgcaatctcgcg
cacaacatcggcgtcccctttaagacgcctgaggagttcttcctcgacgagccgccgcgc
gtctttgcgagggagtttgatctcgcgctgcacccgtacgttgaagccgcaggcacagac
aagggcgagggcgcggacgaggcgcccctcttcgagaaaaagaacaagcaagacgtcgta
ctgttctgcggcccgcccggcgcgggcaagagcacattctactggagacagctccagcct
ctgggctacgagcgcgtgaatcaggacatactcaagacgcgggacaagtgcgtcaagacg
gcgagggagctcctccagggcggaaaatccgtcgccataggtacaagccgccccatggca
agggatgagaaacaatgcgtggctgacaaaacatgccctccagacaatacaaacgccgac
cccgacacgcgcgccgtgtgggtcaatctcgccaagcagcacgacgtccccgtgcgctgc
gtgtggttcaagacgcccctcttcgtctgcgagcacaatgatgtcgtcagggcgctcaac
acaaagatgaatcccgaatccaggacggcgctgccgcagctcgccttcaacggcttcaag
tcgcgcttccgcgagcccaaagccaaggagggcttccaggacgtgacggagctggagttc
aagttccgtggcacgagggaggagcatggcgtgtgggcacggtactggatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (20)   

Download RDF
DBGET integrated database retrieval system