KEGG   Verticillium alfalfae: VDBG_03738
Entry
VDBG_03738        CDS       T02227                                 
Name
(RefSeq) transcriptional regulatory protein SIN3
  KO
K11644  paired amphipathic helix protein Sin3a
Organism
val  Verticillium alfalfae
Pathway
val04139  Mitophagy - yeast
Brite
KEGG Orthology (KO) [BR:val00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04139 Mitophagy - yeast
    VDBG_03738
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:val03036]
    VDBG_03738
Chromosome and associated proteins [BR:val03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Sin3A-HDAC complex
     VDBG_03738
    REST complex
     VDBG_03738
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    VDBG_03738
SSDB
Motif
Pfam: Sin3a_C PAH Sin3_corepress Expansin_C
Other DBs
NCBI-GeneID: 9532478
NCBI-ProteinID: XP_003005785
UniProt: C9SH35
AA seq 1645 aa
MPVVPPSNPSDPHPPSGQGSVILSDVLNRDKSINIFAGFTHDIETAAIRLDDSGKNTTIL
APLNSAVEALPRKPWEDPEDYNRLGTDAYVGDDGQERASRNLRRFVEAHLVPVSPWQENQ
KARTIGGDGEVWWENKDGTKFASGTTLCKNSAGWAGDLSTMSAKNMDDAEAFEADNRRRM
AQETDDLERREREQDDRRRREGFPPAQPHHSNAGSIPIHQPVASRISGAIHSPGGLLANH
GSAAPPMPLGAPSGPPANFGGPLQADPARPPQHGGPNNGPAQHQMFAPISHPTNPPNAHP
GAPGGPPPIFGGPLQQREVSQALQQAPFGGGGGGGGGGGGANNNNPGAQPPPNQAQGGPG
PGGGLAQGQQPILNDQDADMCLSQDALTYLDQVKVQFHDQADVYNRFLDIMKDFKSQAID
TPGVINRVSELFAGHPNLIQGFNTFLPPGYRIECGTGSDPNTIRVTTPMGTTVQSITGRV
TQPDGPHAQPGAAQPLFGPRNNGAGSWPQPQQPQLPQHSIESPEATFSTPVQNGAAAFGQ
AQGLGAPFDAQGPGHQRGSNQMPGNAPPVAGQPPRNAQTPTPQAGAPGVNGSAAQQAGLE
RRGPVEFNHAISYVNKIKDKPEIYKQFLEILQTYQREQKPIQEVYAQVTTLFHTAPDLLE
DFKQFLPESAGQAKGTPGRAADEAAAIAAMTTPGQNPRDAQKLPLIGSFPPPNSASKDNS
KKRPRIDKQTPVPTPAIVEAAAVSSRALPGAPVTNSKRTKLNHKPLATDLPAIEPTLTPI
MPEPVGPSANATSSHDEIAFFDRVKKYLSNKTSYNEFLKVCNLFSQQIIDRPTVYQKGSV
FLAANPELLSFWKQFLNVDSMVDVVDNRPAPPTGKVSLSNCRGYGPSYRLLPKRETLKRC
SGRDELCADLLNDQWASHPTWASEDSGFVAHRKNGFEEGLHRIEEERHDYDFNIEANIKC
IQLLEPVAQQINVMSDAERESFEMPAALRGGSIPVFKRICKKIYGLDKGPEVVNDMFANP
LNVVPVVLARMKQKDEEWRFSQREWEKVWHSQTENMHLKSLDHMGIQVKQTDKRNLSARH
LVDVIKTKHEEQRRQRSLTGKAPRHQFVWNFSDKKIIVELLRLMMLYAVNSGHHSIPEKE
RITDFFESFVPAFFDIPEEEYDGQLPRVQDASDEDDAEESAPAELTNGRNRRNGKKSDLL
RGVLDPGRNGSKPRGHKEDSAASASKETTPDVTSANEEEMPDAPSEHPAPLVSNERWLST
VPQPIVTTGDASLLTDEGELRADGLFTRPWYNFFSNQTIFVFFSVLQTLYKRLSDVKESA
RDVHVEVARLNRPRVAREIGLSENPMDYFEMDDDITKIWSKTVDLIEEYVTGEIDEVRYQ
DVLRHYYLRNGWKLYTIPDLLKTLSRLALTCSSTDTKEKTPDLIHQYLSNREKDETNWQT
EIAARKFAEKCVKDGEMFVISWFPNKSEASVRWLQKEDTTFYMDELKQRERWQYYISSYM
SVEPTEGVPRSRLQKTVLARNLPPIDEKADDNWTPAVAAFSEGLAHKVCLNSLKIVYKER
TSECFIYDHYSNIKDPKEREKITRRCRAGSKKREEVMREKYVLNSKWMKDLSQSDVEKTK
NDWNKWLQDGVAPPAVNGGNMDTTD
NT seq 4938 nt   +upstreamnt  +downstreamnt
atgcccgtggttccgccctccaacccttcggatccgcaccctccttccggacaggggagt
gtcattctctccgatgttctgaatcgagataaaagcatcaatatttttgcaggatttacg
catgacattgaaacagctgccattcgtcttgatgattcaggcaagaatacaacaatcctt
gcgcccctcaactccgcagtcgaagccctcccgcgcaagccctgggaggaccctgaagat
tacaacagactaggcacagatgcctacgtcggcgacgatggtcaggagagggcttcacgg
aatctgcggcgcttcgttgaagcgcacttggtccctgtaagcccctggcaggaaaaccag
aaggcccgcacaatcggcggcgatggcgaggtttggtgggagaacaaggacggcaccaaa
tttgcgtccggaactacgctttgtaagaactctgcgggctgggcgggcgatttgtcgacg
atgagcgcaaagaacatggatgacgccgaggccttcgaggctgacaatcgccgccgcatg
gcccaggaaaccgacgatctagagaggagagagcgagaacaagacgacagacggcgaagg
gagggcttcccaccggcacaaccacatcacagtaacgcgggatcaatacccatccaccag
ccggtcgcgtcgaggatctctggtgccatccacagccctggtggcctcctcgcaaaccac
ggctctgccgcccctccaatgcctcttggagcgccttcagggcctcccgccaactttggc
ggtccgctccaggccgacccggccagacctccccagcacggcggccccaataacggcccc
gcgcagcaccaaatgtttgcgcccatctctcatccgacaaatccgccgaatgcgcatcct
ggcgctcctggcggccctcctcccatatttggaggacctctccagcaacgcgaagtctca
caagcattgcaacaagcgccattcgggggaggtggtggtggtggtggcgggggaggcggc
gccaataacaacaaccctggagcccagcctccaccaaatcaagcgcaaggtggtcctggt
cctggcggcggacttgctcaaggacagcagccaattttgaacgatcaagatgctgacatg
tgcctatcgcaggatgctttgacctacctcgatcaagttaaagtgcagttccacgatcaa
gcagatgtatacaatcgatttctagatatcatgaaggactttaagagccaagcaattgac
acccctggtgtcatcaaccgagtttcagagctcttcgcggggcaccccaacctcatccag
ggcttcaacacgttcttgcctcccggctacagaatcgagtgtggaactggtagtgacccg
aatacgatccgagtcacaacacctatgggaaccacagttcagtccatcacaggccgagtc
actcagcctgacgggccacacgcccagcctggcgccgcccagccgctgtttggcccccgc
aacaacggcgctggcagctggccccagcctcaacagccgcaactgcctcagcatagcatt
gaaagtcctgaagcaaccttcagcacgcctgttcagaacggcgccgcggcctttggccaa
gcgcaaggtctcggcgcacctttcgatgctcaagggccagggcaccagcgaggttcgaac
cagatgccaggtaacgctcctcctgtcgccgggcaacctccacgcaacgcgcagacacca
acgccccaggcaggtgcgccgggcgtcaacggcagtgctgctcagcaagccggactggaa
cgccgaggaccagtcgaatttaaccatgccatcagttacgtgaacaagatcaaggacaag
cctgaaatttacaagcaattcctggaaattcttcaaacatatcagcgagaacagaaacct
attcaagaggtttacgctcaggtcactacgctctttcacaccgcgcctgacctgcttgag
gacttcaagcaatttctccccgagtctgctggtcaagccaagggcactcctggccgtgca
gctgatgaagctgccgctatcgcagccatgacgactccggggcagaacccccgagatgca
cagaagcttccgctcattggaagcttcccaccgcccaacagcgcaagcaaagacaacagc
aagaagaggccgagaatcgacaagcagacgccggtgcctacacctgccattgtggaagct
gctgctgttagcagtcgcgcactccctggcgcacccgtcaccaacagcaaacggactaag
cttaaccacaagcctcttgctaccgatctcccggctatcgagcccaccttgacgcctatc
atgcctgagccagtcggaccatctgctaatgcaacttcgagccatgacgagatcgcgttc
ttcgacagggtcaagaagtacctgagcaacaagacctcgtacaatgagtttctcaaagtc
tgcaacttgttcagtcagcagattatcgaccgccccaccgtctaccagaaaggcagcgtt
tttcttgctgctaaccctgagcttctcagtttctggaaacaatttctcaatgttgattcc
atggtcgacgtggtcgacaaccgcccagcacctcctaccggcaaggtgtctttgagtaac
tgtcgtggttatggtcccagttatcgactcctgcccaagcgtgaaacgctcaaacgctgc
agtggtcgtgacgagctttgtgctgatcttctcaatgatcagtgggccagccaccctacc
tgggcctccgaagattctggattcgtggctcaccgcaagaatggctttgaggaggggctg
caccgcatcgaggaggagcgccacgactacgatttcaacattgaagcgaacattaagtgc
attcaactattagagcccgtggctcagcagatcaacgtcatgtctgatgccgagagggaa
agtttcgagatgcctgctgcacttcgcggtggctccatcccggtcttcaagcgaatctgc
aaaaagatttatggactcgacaagggccccgaggttgtgaacgacatgttcgccaaccca
cttaatgtcgtgcccgttgtcctcgcccggatgaaacagaaggacgaggaatggcgcttc
tctcagcgcgagtgggagaaggtctggcactcgcaaaccgaaaacatgcacctgaagagt
ctcgaccacatgggcatccaggtcaagcagactgacaagcggaatctttcggccaggcat
ctcgttgatgtgattaagacgaagcacgaagagcagcgaagacagcgcagtttgactggg
aaagccccacgtcaccagttcgtctggaacttttctgacaaaaagatcatcgtggagctt
ctccgcctcatgatgctctatgctgtcaacagcggccatcacagcattcccgagaaggaa
agaatcactgacttctttgagtcttttgttcccgcattcttcgatattcccgaggaagag
tatgacggccagctaccccgtgttcaagacgcgtcagacgaagacgatgcggaggaaagt
gccccagccgaactgactaacggaagaaaccgccgaaacggcaagaagagcgacctgctc
cgtggtgttcttgaccctggccgcaatggatctaagcctcgtggccacaaggaagacagc
gctgcgtcggcgagcaaagagacaacgcctgacgtcacctccgccaacgaggaagagatg
ccagatgcgcctagcgagcatcccgctcctctcgtgtcaaatgagcgttggctgtccact
gttcctcagcccattgttaccactggagatgcctcgctgctcacggacgagggtgaattg
agggctgacgggctgttcacccgaccatggtacaacttcttcagcaaccagaccatcttt
gtcttcttcagcgtgttgcaaacgctctacaagagactcagcgacgtcaaagagagcgcg
cgcgacgttcatgtggaagttgcgcgcctcaaccgtccccgggtcgcaagagagattggc
ctctcggagaatcctatggactacttcgagatggatgatgatattacaaagatctggtcc
aagacagttgatttgatcgaggagtatgtcacaggcgagattgatgaggtgcggtatcag
gatgtcctccgccactactacctgcgcaacgggtggaaactctacaccattccggatctt
ctcaagactctcagtcgcctggctctgacctgtagctccaccgacaccaaagaaaagact
ccggatctcatccaccaatacctcagcaaccgtgagaaggatgagacaaactggcagacg
gagatcgccgcgagaaagttcgccgaaaagtgtgtcaaggatggcgagatgttcgtgatt
agctggttccccaacaagtccgaggcaagcgttcgctggctgcagaaggaagacaccacc
ttctatatggatgagctcaagcagcgtgagcgctggcagtactatatctcctcctacatg
tccgtggagccgactgagggcgtccctagatcgcgcctccagaagacggttcttgctcgc
aaccttccgccaatcgacgaaaaggctgacgacaactggactccggctgtggctgcgttc
tccgagggcttggcacacaaagtatgcctgaactcgctgaagattgtctacaaggagcgc
acatctgaatgcttcatctacgatcactactcaaacatcaaagaccccaaggagcgcgag
aagatcaccagacgatgccgtgccggcagcaaaaagcgcgaggaagtcatgcgagagaag
tacgtgctcaacagcaagtggatgaaagatttgagtcaatccgacgtcgaaaagaccaag
aatgactggaataagtggctccaagacggcgttgcgccgcctgctgtcaatggtggcaac
atggacaccactgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (48)   
   KEGG ORTHOLOGY (1)   
   RefGene (44)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (59)   

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