KEGG   Verticillium alfalfae: VDBG_10082
Entry
VDBG_10082        CDS       T02227                                 
Name
(RefSeq) karyopherin Kap123
  KO
K20221  importin-4
Organism
val  Verticillium alfalfae
Pathway
val03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:val00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    VDBG_10082
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:val03009]
    VDBG_10082
Ribosome biogenesis [BR:val03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    VDBG_10082
  Pre-60S particles
    VDBG_10082
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Adaptin_N Cnd1 MMS19_C CLASP_N RIX1 Vac14_Fab1_bd IBN_N IFRD
Other DBs
NCBI-GeneID: 9528732
NCBI-ProteinID: XP_002999788
UniProt: C9SYV7
AA seq 1108 aa
MDKDQLAQLLQASQIRRRNPGSYPQPPGFFSFLLLLLPLLAVPTKPPDTEKVKAVTAELQ
KNYYSQPQSLLLLIEIAVSHNDAGIRQLASVQAQRITAKHWLKVNDDQRNVARKHLIESA
VSDPTTNGRHSKCRLLARAISIDLDNKDAAGQACVEQLLSLVSQESTAAREVGSFTLYAI
LDEDPTNFSEQVPQLLNILKSTIQDPASVDVRLNSVKAIGSLLMLVDPEDDAESLAAIHF
FVQPIVQILKDAVQAEADEQYKVIFEIFQNFLAYDPAFLAPHLKDLIQFMIDLAANTNAE
DEARSQALSFLGQCARYRRMKIQAMKDMGAQLMVKSMQILTEVEDEADPDDTSPAKTALS
LIDQLASDLPPRQVIVPLLETFPQYAQHQDPGHRKAAILALGTAAEGAPDFIATQLKTLL
PMIVKLLNDHDDSVRYAALIGLIHLADEMADELASGHEDLIAALLKNLEAASQESSKKNV
GVIRSVCSALDSLVGEGLEADLMKVYGPKLIVPMGKLLNHEDSGVKAAAAGAIGAIAFSM
GGEAFKPYFKDVMSALGQYVTVTGDDDTLALRSSVCDSMGRIAGAVGPEAFQPYVVDLMK
ASEEALSLDSARLKETSFILWASLSKVYGADFAHFLPGVFKGLFECLESEEEELEIPGLN
ADDAPDGVISVGGRRIKVKPTEDEIDQAIAEEGEDDEDWLDDLAGVTAIDMEQEIALEVF
GDVVTHSCELAAVRQYLEPAMEKILPLVESAYDGSRKAALSTLWRSYARVWQLFEDQSGQ
KWQPGIPLKQTPDASLTALGELVTKATLMLWADDNERDVVTEINRNVGATLKACGPAILT
QEDMLPQTVTVLSTLITRSHPCQQDLGDEEEEQDAEGGSSEFDWLVIDTALDVVLGLATA
LGPDFGELWKVFEKPVLKFASSQESLERSTAVGVIAEAIKFMGGAVTEFTGSLLPVLFHR
LSDEDSLTKSNAAYAIGQLILNSTDTNTTFPRYADILRKLEPLLQVQESRITDNVSGCIC
RMISANPQPALVEKVLPAVLDVLPLKEDYEENEPIYQAIFKLYDQQNPAVQQLTPKILPI
LQQVLSPPEEQLEPETRALVQKLVQALS
NT seq 3327 nt   +upstreamnt  +downstreamnt
atggacaaggaccagttggcgcagctgctccaggcgagccagattcgaagaagaaaccct
ggctcctacccccagccaccaggatttttttctttccttttgcttcttcttcctcttctc
gctgttcctacaaaaccacccgacacggaaaaggtcaaggccgtcaccgccgagctccag
aagaactactactcgcagccccagtccctgctgctgctcatcgagattgccgtctcccac
aatgacgccggcatccgtcagctggcctctgtgcaggcccagcgcatcacggccaagcac
tggctgaaggtcaacgacgaccagcggaacgtcgctcgcaagcacctcattgagagcgct
gtcagcgaccctaccaccaacggtcgccactccaagtgccgtctcctggcccgtgccatc
agcattgacctcgacaacaaggacgccgccggtcaggcctgcgtcgagcagctcctctcc
ctcgtcagccaggagagcacagccgcccgcgaggttggctccttcaccctctacgccatt
ctcgacgaggaccccacaaacttcagcgagcaggtgccccagctcctgaacatcctcaag
tccaccattcaggaccccgccagcgtcgatgtccgcctcaactcggtcaaggccatcggc
tcgctgctgatgctcgtcgaccccgaggacgatgccgagagcctcgctgccattcacttc
ttcgtccagcccattgtccagattctcaaggacgccgtgcaggccgaggccgacgagcag
tacaaggtcatttttgagattttccaaaacttcctcgcctacgaccctgccttcctggca
ccccacctcaaggatctcatccagttcatgattgacctggccgccaacaccaacgcggag
gatgaggcccgttcgcaggctctgtccttcctcggccagtgtgctcgctaccgccgcatg
aagattcaggccatgaaggacatgggtgcccagctcatggtcaagagcatgcagatcctc
accgaggtcgaggacgaggccgaccccgacgacacgtcgcccgccaagactgctctctcc
ctgatcgaccagctcgcgagcgacctgccccctcgccaggtcatcgttcccctgctcgag
acgttcccccagtacgcccagcaccaggaccccggccaccgcaaggccgccatcctcgct
ctcggcacggccgccgagggtgctcccgacttcattgccacccagctcaagactctcctg
cccatgatcgtcaagctcctcaacgaccacgatgacagcgtgcgctacgctgccctcatt
ggtctcatccacctcgccgacgagatggctgatgagctcgcctctggtcacgaggacctc
attgccgctctcctgaagaacctcgaggctgcttcgcaggagtcgagcaagaagaacgtc
ggtgtcatccgctccgtctgcagcgccctcgactcgctcgtcggcgagggtctcgaggcc
gacctcatgaaggtgtacggccccaagctcatcgtgcccatgggcaagctcctcaaccac
gaggactcgggcgtcaaggctgccgccgctggcgccattggcgccatcgccttctccatg
ggtggtgaggccttcaagccttacttcaaggacgtcatgagcgctctcggccagtacgtc
accgtcaccggtgatgatgacaccctcgctctgcgctcctccgtctgcgactccatgggc
cgcatcgccggcgccgtcggccccgaggctttccagccctacgtcgtcgacctcatgaag
gccagcgaggaggcactgtccctcgacagcgcccgcctcaaggagactagcttcattctt
tgggcctcgctctccaaggtctacggtgctgactttgcccacttcctgcccggcgtcttc
aagggcctctttgagtgcctcgagtctgaggaggaggagcttgagatccccggcctcaac
gccgacgacgctcccgatggtgtcatttccgtcggtggccgccgcatcaaggtcaagcct
accgaggacgagattgaccaggccattgctgaggagggtgaggatgacgaggactggctt
gatgacctcgccggtgttaccgccatcgacatggagcaggagatcgctctcgaggtgttc
ggtgacgtcgtcacccactcgtgcgaactcgccgccgtcaggcaatacctcgagcccgcc
atggagaagatccttcccctcgtggagagcgcttatgacggcagccgcaaggccgccctc
tccaccctgtggcgctcatacgcccgcgtctggcagctgttcgaggaccagtccggccag
aagtggcagcctggtattcccctgaagcagacccctgatgcctcgctcaccgccctcggc
gagcttgtcaccaaggccactctcatgctctgggccgacgacaacgaacgtgacgtcgtc
accgagatcaaccgcaacgtcggtgccaccctcaaggcctgcggccccgccatcctgacc
caggaggacatgctcccccagaccgtcaccgtcctcagcactctcatcacccgctcgcac
ccttgccagcaggatcttggtgacgaggaggaggagcaggacgccgagggcggctcgtcc
gagtttgactggctcgtcattgacacggccctcgacgtcgtgctgggcctcgccacggcc
ctcggccccgactttggcgagctctggaaggtctttgagaagccggtcctcaagttcgcc
agctcgcaggagtccctcgagcgctcgaccgccgtcggcgtcattgccgaggccatcaag
ttcatgggtggcgccgtcaccgagttcaccggctcgctgctccccgtgctcttccaccgc
ctctccgacgaggactcgctcaccaagtccaacgccgcctacgccattggccagctcatc
ctcaactcgaccgacaccaacacgaccttccctcgctacgccgacattctgcgcaagctc
gagccccttctgcaggtccaggagtcgcgcatcaccgacaacgtctctggctgcatctgc
cgcatgatcagcgccaacccgcagcccgccctcgtcgagaaggtgctgcccgccgtcctc
gacgtgctccccctgaaggaggactacgaggagaacgagcccatctaccaggccatcttc
aagctctacgaccagcagaaccctgccgtccagcagctgacgcccaagattctgcccatc
ctccagcaggtcctcagcccgcccgaggagcagctcgagcccgagacgcgcgctcttgtg
cagaagctcgtccaggccctgtcctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

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