KEGG   Variovorax sp. PMC12: C4F17_04980
Entry
C4F17_04980       CDS       T05380                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vam  Variovorax sp. PMC12
Pathway
vam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4F17_04980
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_04980
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_04980
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484
Other DBs
NCBI-ProteinID: AVQ80362
UniProt: A0A2P1V5A9
Position
1:complement(1085462..1087804)
AA seq 780 aa
MPRTVQVHTVLGAEQLKFRAMRGHEGLSQLFEFEVDMVGTSFNIELKQLLGTSLTLELAD
DGGPRFLNGTVVRFELVGRANETGRHYVYRALVQPWLWYLTRTTDSRIFQNKSVPEVLDE
VLGKYGFEFEKRLTASYRPWENCVQYQESDFAFVSRLMEHEGIAYHFEHGNGTHLLVLCD
DAGGYTPLPGHATIPYRPRDRVLNAMEPCIDQWRVSEQITSGRVMLDDFDFRKSRASLQS
VQQDPKGHDHSTYEVYEWLGGYSEHEQGDAYARVRLQELQCSHELARGHTNVVGMAPGYL
FQMTHCPREADNREYLVTETRYDLQEPEYSSGGSSESVCEFDFTVLPSSVAYRPARKTPR
PRTNGPQTATVVGPEEIWTDRFGRVKLQFRWDRYGQSDENSSCWVRVSSSWAGANFGTMH
MPRVGQEVIVDFIGGEPDRPIITGRVYNSDQMPPWELPANATASGILTRSSSGGAANQAN
MLRFEDRTGAEQIWLHAERNLDVEVEADETHTTDGTRTTLIKGHESATYQDGETRDITAG
ARETITGGDTRSVTGGFTETVTGGVNQTISGGKTRMLSGGLQDTITGGVNSAITGGYHGT
INGQEVRFVSAGRQDTIDTSNTVLVNGPSTTTVTGPTVHTSPDVTFNTTNHIHNTTQHVI
NTTVYNTTSNTYNNLAVSYTNNSVSYTNNYAKSSDWRLTRSGGAGFRFGAVGMSLDFWGV
RQQFYGINSQYAVLKVDFLTYKIANKGIDITNQAMEVGRTAVRFYMDGMAAYAQAMHLVM
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgccgcgtaccgtccaagtccacaccgtgctcggcgccgagcagctcaagttccgcgca
atgcgcgggcacgagggcctctcgcagctcttcgagttcgaggtggacatggtcggcacc
agcttcaacatcgagctcaagcagctgctgggcacctcgctcacgctggagctggccgac
gacggcggcccgcgttttctcaatggcaccgtggtgcgcttcgagctggtgggccgcgcc
aacgaaaccggccgccactacgtctaccgtgcgctggtgcagccgtggctctggtacctc
acgcgcaccaccgacagccgcatcttccagaacaagagcgtgcccgaggtgctcgacgaa
gtgctgggcaagtacggcttcgagttcgagaagcgcctcacggccagctaccgcccgtgg
gaaaactgcgtgcagtaccaggagagcgacttcgcgttcgtgagccggctcatggagcac
gaaggcatcgcctaccacttcgagcacggcaacggcacccacctgctggtgctgtgcgac
gacgccggcggctacacgcccctgcccggccacgccaccattccctaccgcccgcgcgac
cgcgtgctcaacgcgatggagccctgcatcgaccagtggcgcgtgtccgagcagatcacc
tcgggccgcgtgatgctcgacgacttcgacttcaggaaatctcgcgcctcgctgcagagc
gtgcagcaggacccgaagggccacgaccattcgacctacgaggtgtacgaatggctcggc
ggctacagcgaacacgagcaaggcgacgcctacgccagggtccgcctgcaggaactccag
tgctcgcacgaactggcgaggggccacaccaatgtcgtgggcatggcgcccggctacctg
ttccagatgacgcactgcccgcgcgaggccgacaaccgcgagtacctcgtcaccgagacc
cgctacgacctgcaggagcccgagtactccagcggcggcagcagcgaatcggtgtgcgaa
ttcgacttcaccgtgctgccttcgagcgtggcctaccgccccgcgcgcaagacgccgcgc
ccgcgcaccaacggcccgcagaccgccaccgtggtcggccccgaagaaatctggaccgac
cgcttcggccgcgtgaagctgcaattccgctgggaccgctacggccagtccgacgagaac
agctcctgctgggtgcgcgtgtcgagcagctgggccggcgccaacttcggcaccatgcac
atgccgcgcgtgggccaggaagtcatcgtcgatttcatcggcggcgagcccgaccgcccc
atcatcacaggccgcgtctacaacagcgaccagatgccgccctgggagctgcccgccaac
gccacggccagcggcatcctcacccgctccagcagcggcggcgcggccaaccaggccaac
atgctgcgcttcgaggaccgcacgggcgcagagcagatctggctgcacgccgagcgcaac
ctcgacgtggaagtggaggccgacgagacccacaccaccgacggcacccgcaccacgctc
atcaagggccacgagtcggccacctaccaggacggcgagacgcgtgacatcaccgccggg
gccagggaaaccatcaccggcggcgacacccgcagcgtgaccggcggcttcaccgagacc
gtgaccggcggcgtgaaccagaccatctcgggcggcaagacgcgcatgctcagcggcggc
ctgcaggacaccatcacgggtggcgtcaactccgccatcaccggcggctaccacggcacc
atcaacgggcaggaagtgcggttcgtgagcgcgggccggcaggacaccatcgacacatcg
aacacggtgctggtcaacggcccctcgaccaccaccgtcaccggcccgacagtgcacacc
tcgccggacgtgaccttcaacaccaccaaccacatccacaacacgacgcagcacgtcatc
aacaccaccgtctacaacacgacgtcgaacacgtacaacaacctggcggtgagctacacc
aacaactcggtcagctataccaacaactacgccaagagcagcgactggcggctgacgcgc
tccggcggcgcgggtttccgcttcggcgcggtgggcatgtcgctcgacttctggggcgtg
cgccagcagttctacggcatcaactcgcagtacgcagtgctcaaggtcgacttcctgacc
tacaagatcgcgaacaagggcatcgacatcaccaaccaggccatggaagtcggcaggacc
gcggtccgcttctacatggacggcatggcggcctatgcgcaggccatgcacctcgtcatg
tga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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