KEGG   Variovorax sp. PMC12: C4F17_09320
Entry
C4F17_09320       CDS       T05380                                 
Name
(GenBank) peptide ABC transporter
  KO
K02033  peptide/nickel transport system permease protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_09320
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_09320
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    C4F17_09320
SSDB
Motif
Pfam: BPD_transp_1 BPD_transp_1_N CRIM1_C
Other DBs
NCBI-ProteinID: AVQ81128
UniProt: A0A2P1V7L2
Position
1:complement(2005240..2006181)
AA seq 313 aa
MLTFLGKRLLATLPVLLVVALAIFMIVRLTPGDPAAVIGGNSATNDDLDRIRAQLGLTRP
LWEQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLGTLA
AWRMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPWLNQ
LVLPCLTLAITYVALLSRVTRAAVSEALTEDYIRTARAKGITELEVLKHHALRNAAVPVV
TVIGVSAALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVNLLV
DLSYLFIDPRIRY
NT seq 942 nt   +upstreamnt  +downstreamnt
atgctcacgtttctcggcaagcgcctgctcgccacgctgccggtgctgctggtggtggcg
ctcgcgatcttcatgatcgtgcgcctcacccccggcgacccggcggccgtgatcggcggc
aacagcgccaccaacgacgacctggaccgcatccgcgctcagctgggcctgacccgcccg
ctgtgggagcagttcgcgatctggtgcaacggcgtgctgcacggcgacctgggcttctcg
ttcttcctgaacaagccggtgaccgagctcatcggccagcgcatggagcccacgctctcg
ctggccggcggcacgctgctgctggcggtggccatcgcgctgccgctgggcacgctggcc
gcatggcgcatgggcggctggctcgacaaggcggtcatggcgttctcggtggccgggttc
tcggtgccggtgttcgtggtcggctatgtgctgatctacctgctggcgatgaagctgcag
tggtttccagtgcagggctaccggcgcatcgccgatggcgtggggccgtggctgaaccag
ctggtgctgccgtgcctcacgctggccatcacctacgtggcgctgctgtcgcgcgtcacg
cgggcggcggtgagcgaggcgctgaccgaagactacatacgcaccgcgcgcgccaagggc
atcaccgagctggaagtgctcaagcaccacgcgctgcgcaatgcggcggtgccggtggtc
acggtgatcggcgtgagcgcggcgctgctgctgggcggcgtggtggtcaccgaaaccgtg
ttcgcgattccggggctgggccagctcacggtcgacgcggtgctcaaccgcgactttccg
gtgctgcagggcgtggtgctgttcttcgcggtggtgtacgtggccgtcaacctgttggtg
gacctgagctatctcttcatcgatccgcgcatccgctattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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