KEGG   Variovorax sp. PMC12: C4F17_10890
Entry
C4F17_10890       CDS       T05380                                 
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02010  ABC transporters
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C4F17_10890
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_10890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_10890
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    C4F17_10890
SSDB
Motif
Pfam: Peripla_BP_6 ANF_receptor Peripla_BP_5 ETF Glyco_trans_4_4 Peripla_BP_3
Other DBs
NCBI-ProteinID: AVQ81410
UniProt: A0A2P1V8F0
Position
1:complement(2349839..2351005)
AA seq 388 aa
MKVMNRIRTLAAVAVGIGALGAASAWAADLKVGFITSLSGPVSSLGIPYDKGMKAAVAYK
SEVGGRKVQVIQLDDASDPSTAARNARKLIEEDKVDVIIGTAGAPGSLAIAGVARETKTP
LISIANADLAGEEGAWMVTLPQPAPLMMGAMVEKMKQAGVKTVAYIGYSDAWGDLVYDAL
MKSAPAAGIKVVSNERYARSDSSVAGQVLKIVALRPDAVITGASGTPGALPYLALAERGY
KGKIYGMHSLINPDFIRVGGPSVEGLLAPTGPVVVAEQLPDANPMKKIAMDFRTAYQKAN
GAPPTDTFSAYSFDAWLIYLDAAQRALASKAEPGTPQFRLALRDAIVSTKELVGTHSVYN
FKPTDRYGSDDRSRVVVKLDKGQWKLVP
NT seq 1167 nt   +upstreamnt  +downstreamnt
atgaaagtcatgaaccgaattcgcacactcgcggccgtggccgtgggtatcggcgcgctg
ggcgccgcgagcgcctgggccgccgatctcaaggtcggtttcatcacttcgctgtcgggg
ccggtgtcgtcgctgggcattccctacgacaagggcatgaaggccgcagtcgcctacaag
tcggaagtgggtggccgcaaggtgcaggtgatccagctcgacgacgcgtccgacccgtcc
accgccgcgcgcaatgcacgcaagctgatcgaggaagacaaggtcgacgtcatcatcggc
acggccggtgcgcctggctctctggccatcgccggcgtggcgcgtgaaaccaagacgccg
ctcatctccatcgccaatgccgacctggccggcgaggagggcgcatggatggtgacgctg
ccgcagcccgcgccgctgatgatgggcgcgatggtcgagaagatgaagcaggccggcgtg
aagacggtggcctacatcggctactccgacgcctggggcgacctggtgtacgacgcgctc
atgaagtcggcgcccgccgccggcatcaaggtggtgagcaacgaacgctatgcgcgcagc
gattcgtcggtggccgggcaggtgctgaagatcgtggcgctgcggcccgacgcggtgatc
accggcgcatcgggcacgcccggcgcgctgccctacctggcgctggcagagcgcggctac
aagggaaagatctacggcatgcactcgctgatcaaccccgacttcatccgcgtcggcggc
ccgtcggtcgaaggcctgctggcgcccaccggcccggtggtggtggccgagcagttgccc
gacgccaacccgatgaagaagatcgcgatggacttccgcaccgcctaccagaaggccaac
ggcgcgccgcccaccgacaccttctcggcctacagcttcgatgcatggctgatctacctc
gatgccgcgcagcgtgcgctggccagcaaggccgagcccggcacgccgcagttccgcctt
gcattgcgtgacgccatcgtcagcaccaaggagctggtgggcacgcactcggtctacaac
ttcaagcccaccgatcgctacggctcggacgaccgctcgcgcgtcgtcgtgaagctcgac
aaaggccaatggaagctggtgccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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