KEGG   Variovorax sp. PMC12: C4F17_14340
Entry
C4F17_14340       CDS       T05380                                 
Name
(GenBank) two-component system response regulator GlrR
  KO
K07715  two-component system, NtrC family, response regulator GlrR
Organism
vam  Variovorax sp. PMC12
Pathway
vam02020  Two-component system
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4F17_14340
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_14340
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:vam02022]
    C4F17_14340
Two-component system [BR:vam02022]
 NtrC family
  GlrK-GlrR (amino sugar metabolism)
   C4F17_14340
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 AAA_16 FleQ AAA_2 AAA OKR_DC_1_N AAA_3 HTH_8 MCM TsaE TIP49
Other DBs
NCBI-ProteinID: AVQ82042
UniProt: A0A2P1VA40
Position
1:3068035..3069423
AA seq 462 aa
MSTTGARLLVVDDDPDMLRLLSMRLSSAGYQVTAVTSAETALTQLEIEHPQLVLSDVRLP
GRDGLQLFDEIRKRHPSLPVILLTAHGTIPDAVEATARGVFTYLTKPYDGRELLDKISQA
LALGAPTTTPSKTGDDSWRSEIVSRSNRMAELLAEARMVAKSDASVLLRGDSGAGKELLA
RAIHKASARADKPFVAVNCGAIPEALLESELFGHMKGAFTDAHANHKGLFQQADGGTLLL
DEIGDMPPALQVKLLRVLQERAVRPLGASQSIQVDVRIVSATHRDLDAAMEAGQFREDLY
YRLNVVTLTLPPLSARREDIPLLANHFLQRLSTKYGKRLSGFAPEALKALTTAAWPGNVR
QLFNVVEQVCALSSSPLIPLALVQRALRVPSVEVQTYAEAKQRFERDYLVGLLKLTDGNV
ADAARLADRNRTEFYRLLQKHELTPGHFKADAVAGGSDPVAE
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgagcactaccggcgcccgcctcctcgtggtcgacgacgacccggacatgctgcggctg
ctctcgatgcggctgagctcggcgggttaccaggtcacggccgtgacctcggccgaaacc
gcgctcacccagctcgagatcgagcatccgcaactggtgctgagcgacgtgcgcctgccc
gggcgcgacggcctccagctgttcgacgagatccgcaagcgccatccgtcgctgcccgtc
atcctgctgaccgcgcacggcaccatccccgacgcggtcgaggccacggcgcgcggcgtg
ttcacctacctcaccaagccctacgacggccgcgagctgctcgacaagatctcccaggcg
ctggccctcggcgcgccgaccaccacgccgagcaagaccggcgacgacagctggcgctcc
gagatcgtgagccgcagcaaccgcatggccgagctgctggccgaggcgcgcatggtggcc
aagtcggatgcttcggtgctgctgcgcggcgactccggcgccggcaaggaactgctggcg
cgtgccatccacaaggccagcgcgcgcgccgacaagcctttcgtggcggtcaattgcggc
gccatccccgaggcgctgctcgagtcggagctgttcggccacatgaagggcgccttcacc
gacgcccatgccaaccacaagggcctgttccagcaggccgacggcggcacgctgctgctc
gacgaaatcggggacatgccgcccgccctgcaggtcaagctgctgcgcgtgctgcaggag
cgcgcggtgcgcccgctgggcgcgagccagtcgatccaggtcgacgtgcgcatcgtctcg
gccacccatcgcgacctcgacgccgcgatggaagccgggcagttccgcgaagacctctat
taccgcctgaacgtggtgacgctcacgctgccgccgctgtcggcgcggcgcgaagacatc
ccgctgctggccaaccacttcctgcagcggctgtcgaccaagtacggcaagcggctgtcg
ggtttcgcgcccgaggcgctgaaggcgctgaccacggccgcctggccgggcaacgtgcgc
cagctgttcaacgtggtggagcaggtgtgcgcgctgtcgagctcgccgctgatcccgctg
gcgctggtgcagcgcgcgctgcgcgtgcccagcgtcgaggtccagacctatgccgaggcc
aagcagcgcttcgagcgcgactaccttgtcggcctgctcaagctgacggacggcaacgtg
gccgacgcagcccgcctggccgaccggaatcgcacggagttctaccggctgttgcagaag
cacgagctcacgcccgggcacttcaaggccgacgctgtcgctgggggtagcgaccctgtc
gccgagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (14)   
   Pfam (14)   
All databases (23)   

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