KEGG   Variovorax sp. PMC12: C4F17_15820
Entry
C4F17_15820       CDS       T05380                                 
Symbol
tuf
Name
(GenBank) elongation factor Tu
  KO
K02358  elongation factor Tu
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:vam03012]
    C4F17_15820 (tuf)
   03029 Mitochondrial biogenesis [BR:vam03029]
    C4F17_15820 (tuf)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vam04147]
    C4F17_15820 (tuf)
Translation factors [BR:vam03012]
 Eukaryotic type
  Elongation factors
   C4F17_15820 (tuf)
 Prokaryotic type
   C4F17_15820 (tuf)
Mitochondrial biogenesis [BR:vam03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Mitochondrial translation factors
    C4F17_15820 (tuf)
Exosome [BR:vam04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   C4F17_15820 (tuf)
  Exosomal proteins of breast cancer cells
   C4F17_15820 (tuf)
  Exosomal proteins of colorectal cancer cells
   C4F17_15820 (tuf)
SSDB
Motif
Pfam: GTP_EFTU GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 RsgA_GTPase cobW
Other DBs
NCBI-ProteinID: AVQ82302
UniProt: A0A2P1VDQ0
Position
1:complement(3410200..3411393)
AA seq 397 aa
MAKGKFTRTKPHVNVGTIGHVDHGKTTLTAAIATVLSAKFGGEAKAYDQIDAAPEEKARG
ITINTAHVEYETANRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHI
LLARQVGVGYIIVFLNKCDMVDDKELLELVEMEVRELLDKYEFPGDDTPIIHGSAKLALE
GDKGELGEGAIMKLAEALDTYIPTPERAVDGTFLMPVEDVFSISGRGTVVTGAVERGVIK
VGEEIEIVGIRPTVKTTCTGVEMFRKLLDQGQAGDNVGVLLRGTKREEVERGQVLCKPGS
IKPHTHFTAEVYVLSKDEGGRHTPFFNNYRPQFYFRTTDVTGAIELPKDKEMVMPGDNVS
ITVKLINPIAMEEGLRFAIREGGRTVGSGVVAKILDI
NT seq 1194 nt   +upstreamnt  +downstreamnt
atggcaaaaggtaaattcacccgcaccaagcctcacgtcaacgtgggcacgatcggtcac
gtcgaccacggcaagaccacgctgacggctgcgatcgcaacggtgctgtcggccaagttc
ggcggcgaagccaaggcctacgaccagatcgacgctgcgcctgaagaaaaggcccgcggc
atcacgatcaacaccgcgcacgtcgagtacgaaacggccaaccgccactacgcacacgtc
gactgccccggccacgccgactacgtgaagaacatgatcaccggcgctgcccagatggac
ggcgccatcctggtgtgctcggccgccgacggcccgatgccccagacccgtgaacacatc
ctgctggctcgccaggtgggcgtgggctacatcatcgtgttcctgaacaagtgcgacatg
gtcgacgacaaggaactgctcgagctggtcgaaatggaagttcgcgaactcctcgacaag
tacgaattccccggcgacgacacccccatcatccacggctcggccaagctcgccctggaa
ggcgacaagggcgaactgggcgaaggcgccatcatgaagctggccgaagccctggacacg
tacatcccgacgcccgagcgcgccgtggacggcacgttcctgatgcccgtggaagacgtg
ttctcgatctcgggtcgcggcaccgtggtgaccggcgctgtcgagcgcggcgtgatcaag
gttggtgaagaaatcgaaatcgtgggcatccgcccgacggtcaagaccacctgcaccggc
gtggaaatgttccgcaagctgctggaccagggtcaagccggcgacaacgtgggcgtgctg
ctgcgcggcacgaagcgcgaagaagtcgagcgcggccaagtgctgtgcaagcccggctcg
atcaagccgcacacgcacttcaccgccgaggtgtatgtcctgtcgaaggacgaaggcggc
cgtcacacgccgttcttcaacaactatcgcccgcagttctacttccgcacgacggacgtg
accggcgcgatcgagctgcccaaggacaaggaaatggtcatgcccggcgacaacgtcagc
atcaccgtgaagctgatcaacccgatcgcgatggaagaaggcctgcgcttcgccatccgt
gaaggcggccgcaccgtgggttcgggcgtcgttgccaagatcctcgacatctaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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