KEGG   Variovorax sp. PMC12: C4F17_17820
Entry
C4F17_17820       CDS       T05380                                 
Name
(GenBank) type VI secretion system tip protein VgrG
  KO
K11904  type VI secretion system secreted protein VgrG
Organism
vam  Variovorax sp. PMC12
Pathway
vam03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    C4F17_17820
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vam02044]
    C4F17_17820
Secretion system [BR:vam02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   C4F17_17820
SSDB
Motif
Pfam: Phage_GPD Phage_base_V DUF6484 Gp5_C Phage_spike
Other DBs
NCBI-ProteinID: AVQ82668
UniProt: A0A2P1VBW2
Position
1:complement(3854680..3857049)
AA seq 789 aa
MARVVTAHTPLPPDQLLFRSMHGKEALSELFEFEVDLLSPNTSVDMKAVLGKPLTLEIVT
IDGTPRYLNGQITRFTMIGREESSSRYVVYRALVRPWLWYLTRTSDCKIFQNKSVVDILD
EVLGEYGFAFEKKLSATYRQRDYSVQYQETDFAFVSRLMEHEGIYYYFRHDENQHTLVLA
DDMGAHDTLPGYPRIGYLASDRAGETGREVIDQWEVTEEIRPGTYVVDDFDFKKPKADLL
NTRSQPRENDHGRYEMYEWLGGYSDAGQGEHYARIRLEEAQAQAEVDTGHCNVRGMAPGY
RFDMQNAPRDEDNKEYLIVSVTYNLREGGYATGSPDGFYSFDFDVQPTSFPFRAPRVTRM
PTTHGPQTATVVGPPGEDIWIDKYGRVKVQFRWDRYGQRNEDSSCWVRVSSAWAGSNFGA
VNHPRVGQEVIVDFIAGCPDRPIIIGRVYNADQMPPLELPAKATVSGFISRTIKGDGELA
NHFVIDDDPGSESIKMHAQKDFSLSVENNETHTVDGTRDTLIEGADTYTTNTSLDETVNG
PHTLTVNKGGPQTITVNGGNQFIKVDGGDQQVDVIGNQTIHVTGKRKDTVDSGEERIIGT
SLKEDIAGPQTTKVVGLYTEETKGKKVTVDGDEDYLVKGAQKVHATTSLKATTDGPMNLE
STAADITVKSPTKIVLDAPHVEDKSAKKVTFTDWGIAFKGFNMGINGINVSLNGTSLFVN
GLVTSIAGLNLGFNAYSLTGAINKFDVYSSSGAMGLFTTTQTVFTADNRAMKIDLSQIKV
NPRGITVYL
NT seq 2370 nt   +upstreamnt  +downstreamnt
atggccagagtcgtcaccgcacacacgccgcttccaccggaccagctgctgttccgttcg
atgcacggcaaggaagcgctgtcggagctcttcgagttcgaagtcgacctgctgagcccc
aacacctccgtcgacatgaaggcggtgctcggcaagccgctcacgctcgagatcgtcacc
atcgacgggacgccgcgctatctcaacgggcagatcacgcgcttcacgatgatcgggcgc
gaagagagttcgtcgcgctatgtggtgtaccgggcgctcgtgcggccgtggctctggtac
ctcacgcgcaccagcgactgcaagatcttccagaacaagtcggtggtcgacatcctggac
gaagtgctcggcgagtacgggttcgcgttcgagaagaagctcagcgccacctaccgccag
cgcgactattcggtgcagtaccaggagaccgacttcgccttcgtgagccggctgatggaa
cacgaaggcatctactactacttcaggcacgacgagaaccagcacacgctggtgctggcc
gacgacatgggtgcgcacgacacgctgccgggctatccgcgcatcggctacctcgccagc
gatcgcgcgggcgagacgggccgcgaagtcatcgaccagtgggaggtgaccgaggagatt
cgcccgggcacctacgtggtcgacgacttcgacttcaagaagcccaaggccgacctgctc
aacacgcgcagccagccgcgcgagaacgaccacggccgctacgagatgtacgagtggctc
ggcggctacagcgacgcggggcagggcgagcactacgcgcgcatccggctcgaggaagcg
caggcgcaggccgaagtcgacaccggccactgcaacgtgcgcggcatggcgcccggctac
cgcttcgacatgcagaacgcgccgcgtgacgaggacaacaaggaatacctgatcgtctcg
gtcacgtacaacctgcgcgagggcggctatgcgacgggcagtcccgacggtttctacagc
ttcgacttcgacgtgcagcccacgtcgtttccgttccgcgcgccgcgcgtcacgcggatg
ccgaccacgcatggcccgcagaccgccacggtcgtgggcccgcccggtgaagacatctgg
atcgacaagtacggccgcgtgaaggtgcagttccgctgggaccgctacggccagcgcaac
gaggacagctcatgctgggtgcgcgtgtccagcgcctgggccggttcgaacttcggcgcg
gtgaaccacccgcgcgtggggcaggaagtgatcgtcgacttcatcgccggttgccccgac
cggccgatcatcatcggccgtgtctacaacgccgaccagatgccgccgctcgaactgccg
gccaaggcgacggtcagcggcttcatcagccgcaccatcaagggcgacggcgagctggcc
aaccatttcgtgatcgacgacgaccccggcagcgagtcgatcaagatgcacgcgcagaag
gacttcagcctcagcgtggagaacaacgaaacccacaccgtggacggcacgcgcgacacg
ctgatcgaaggcgcggacacctacacgaccaacacctcgctcgacgagacggtcaacggg
ccgcacacgctgacggtgaacaagggcgggccgcagacgatcaccgtcaacggcggcaac
cagttcatcaaggtggatggcggcgaccagcaggtcgacgtcatcggcaaccagaccatc
catgtcaccggaaagcgcaaggacacggtcgacagcggtgaagagcggatcatcggtacc
tcgctcaaggaagacatcgccggtccccagaccaccaaggtggtcggcctgtacaccgaa
gaaaccaagggcaagaaggtgacggtcgacggcgacgaggactatctcgtcaagggcgcg
cagaaggtgcatgcgaccacctcgctgaaagcgacgaccgatggccccatgaacctggag
agcaccgcggcggacatcacggtcaagtcgccgaccaagatcgtgctggatgcgccccat
gtcgaggacaagtccgccaagaaggtgaccttcacggactggggcattgccttcaagggc
ttcaacatggggatcaacgggatcaacgtgagcctcaacggcacttcgctgttcgtgaac
ggcctggtgaccagcattgccgggctgaacctggggttcaatgcctactcgctcacgggc
gccatcaacaagttcgacgtgtattcctccagtggtgcgatgggcctgttcaccaccacc
cagacggttttcacggcggacaacagggcgatgaagatcgacttgtcgcagatcaaggtg
aaccccaggggaatcaccgtctatctctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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