KEGG   Variovorax sp. PMC12: C4F17_18185
Entry
C4F17_18185       CDS       T05380                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02010  ABC transporters
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C4F17_18185
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_18185
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_18185
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    C4F17_18185
SSDB
Motif
Pfam: Peripla_BP_6 Peripla_BP_5 ANF_receptor LppC
Other DBs
NCBI-ProteinID: AVQ82733
UniProt: A0A2P1VC51
Position
1:3942166..3943365
AA seq 399 aa
MTMTKRTILSTLLLASFGVLGTTAAQAADEPLRIGLIATYSGPYADYGRQFDAGIALYLK
EHGGKMGGRTVEIIKKDTAGPAPDAAKRIAQELIVRDKVSVLTGLDFSPNAYAVGAIATQ
AKIPTIVMNAASSAITTSSPYVARLSFTVQQVTDPMARYMLKEGIKDAYTVVADYASGVD
AETAFKKTFTAGGGKVSGEVRTPMNNPDFSAYVQRIKDAKPQAVFFFFPSGVMPPAFLKV
WKERGMEQAGIKLYATGEATDDSYLDATGDVALGLVTSHHYSFAHPSPKNQKFVRDFAAD
NGAKLRPSYFAVTAYDAMAAIDLALAKTKGDTGGDKFMEALKGLSFESPRGPIEIDPATR
DIVQTVYIRKTERVNGQLVNVEFDKFDRVKDPAKEAAAK
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgacgatgaccaagagaaccatcctctcgaccctgctgctggcgagcttcggcgtgctg
ggcacgaccgccgcgcaggcggccgacgagcccctgcgcatcggcctgatcgcgacctac
tccggaccctatgccgactacggccgccagttcgacgccggcatcgcgctctacctgaag
gagcacggcggcaagatgggcggccgaacggtcgagatcatcaagaaggacaccgccggc
cccgcgcccgacgccgccaagcgcatcgcgcaggaactgatcgtgcgcgacaaggtgagc
gtgctcaccggcctggacttcagccccaacgcctacgccgtgggcgccatcgccacgcag
gccaagatcccgaccatcgtgatgaacgccgcctcctcggccatcaccaccagctcgccc
tacgtggcgcgcctgtcgttcaccgtgcagcaggtcaccgacccgatggcgcgctacatg
ctcaaggaaggcatcaaggacgcctacaccgtggtcgccgactacgcttcgggcgtcgac
gccgagaccgcgttcaagaagaccttcaccgccggcggcggcaaggtgtcgggcgaagtg
cgcacgccgatgaacaaccccgacttctcggcctacgtgcagcgcatcaaggacgccaag
ccccaggccgtgttcttcttctttccctcgggcgtgatgccgccggccttcctgaaggtc
tggaaggaacgcggcatggagcaggccggcatcaagctctacgccaccggcgaagccacc
gacgacagctacctcgacgccaccggcgacgtggcgctgggcctggtcaccagccaccac
tactcgttcgcgcacccctcgcccaagaaccagaagttcgtgcgcgatttcgccgccgac
aacggcgccaagctgcgccccagctacttcgccgtgaccgcctacgacgccatggccgcc
atcgacctcgcgctggccaagaccaagggcgacaccggcggcgacaagttcatggaggcg
ctgaagggcctgagcttcgagagcccgcgcggcccgatcgagatcgacccggccacgcgc
gacatcgtgcagaccgtctacatccgaaagaccgagcgcgtgaacggccagctggtgaac
gtcgaattcgacaagttcgaccgcgtgaaggacccggcgaaggaagccgcggccaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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