KEGG   Variovorax sp. PMC12: C4F17_18635
Entry
C4F17_18635       CDS       T05380                                 
Name
(GenBank) Crp/Fnr family transcriptional regulator
  KO
K10914  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02020  Two-component system
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C4F17_18635
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_18635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vam03000]
    C4F17_18635
Transcription factors [BR:vam03000]
 Prokaryotic type
  Helix-turn-helix
   CRP/FNR family
    C4F17_18635
SSDB
Motif
Pfam: cNMP_binding HTH_Crp_2 HTH_24 MarR_2 TrmB HTH_36 GntR Exotox-A_target
Other DBs
NCBI-ProteinID: AVQ82815
UniProt: A0A2P1VCC2
Position
1:complement(4035644..4036354)
AA seq 236 aa
MSTNKQPLQHASLTIPQLLQGSAWFPLLDVAAGERVLDEMREVEVAPGAALCRRGDTPAH
WYGTLEGLLKWSITSSDGRSVTLGGLSVGSWFGEGTLLRALPRSADIIALRPSRVAQLPL
ETFEWLHRTQRGFDHFLLQQINERLHWFMGSYAAHRLLDADSQVARALAGLFHPWLHPGS
EPHLQTSQEEIANLSGVSRQRCNAALNRLKEAGFLRIEYGGITVIDLEGLRRFISE
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtccacgaacaagcaaccgcttcagcacgcgtcgctgaccatcccgcaactgctgcag
ggctcggcgtggtttccgctgctcgacgtggccgccggagagcgcgtgctcgacgagatg
cgcgaggtcgaggtggcgcccggtgccgcgctctgccggcgcggcgacacgccggcgcac
tggtacggcacgctcgaagggctgctcaagtggtcgatcacctcgagcgacgggcgctcg
gtgacgctgggcggactgtcggtgggcagctggttcggcgaaggcacgctgctgcgcgcg
ctgccgcgttcggccgacatcatcgcgctgcggcccagccgcgtggcgcagctgccgctg
gagaccttcgagtggctgcaccgcacgcagcgcggcttcgaccacttcctgctgcagcag
atcaacgagcggctgcactggttcatgggcagctatgcggcgcaccgcctgctcgatgcc
gacagccaggtggcgcgcgcgctggccgggctgttccatccgtggctgcatccgggcagc
gagccgcacctgcagacctcgcaggaggagatcgcgaacctgtcgggcgtgtcgcgccag
cgctgcaacgcggcgctgaaccggctgaaggaagcgggctttcttcgcatcgagtacggc
gggatcaccgtgatcgacctcgaagggctgcgccgcttcatcagcgagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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