KEGG   Variovorax sp. PMC12: C4F17_23735
Entry
C4F17_23735       CDS       T05380                                 
Symbol
trmL
Name
(GenBank) tRNA (uridine(34)/cytosine(34)/5-carboxymethylaminomethyluridine(34)-2'-O)-methyltransferase TrmL
  KO
K03216  tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]
Organism
vam  Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:vam00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vam03016]
    C4F17_23735 (trmL)
Enzymes [BR:vam01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.207  tRNA (cytidine34-2'-O)-methyltransferase
     C4F17_23735 (trmL)
Transfer RNA biogenesis [BR:vam03016]
 Prokaryotic type
  tRNA modification factors
   Methyltransferases
    C4F17_23735 (trmL)
SSDB
Motif
Pfam: SpoU_methylase Malate_DH
Other DBs
NCBI-ProteinID: AVQ83722
UniProt: A0A2P1VEW8
Position
1:complement(5086457..5086918)
AA seq 153 aa
MFHIVLVHPEIPPNTGNVIRLAANTGCTLHLVEPLGFSMDDRLLRRAGLDYHEYAEVKRH
ADWQALLATELPPADRMFALTTRGTRAVHDVRFQPGDWLVFGSETSGLPPAVRDGFAEAQ
RLRLPMREGQRSLNLSNAVAVTVFEAWRQNGFG
NT seq 462 nt   +upstreamnt  +downstreamnt
atgttccatatcgtcctggtccaccccgagattccgccgaacaccggcaacgtcatccgg
ctcgccgccaacaccggctgcacgctgcacctggtcgagccgctcggcttttcgatggac
gaccgcctgctgcgccgcgccgggctcgactatcacgagtacgccgaagtcaagcgccac
gccgactggcaggccctgctcgccaccgaactgccgccggccgaccggatgttcgccctc
accacccgcggcacgcgggccgtgcacgacgtgcgcttccagcccggcgactggctggtc
ttcggctcggagaccagcggcttgccgcccgccgtgcgcgacggcttcgccgaggcccag
cggctgcggctgccgatgcgcgaggggcagcgcagcctgaatctttcgaacgcggtggcc
gtcaccgtgttcgaagcctggcggcaaaacggcttcgggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (11)   

Download RDF
DBGET integrated database retrieval system