KEGG   Variovorax sp. PMC12: C4F17_23955
Entry
C4F17_23955       CDS       T05380                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_23955
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_23955
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    C4F17_23955
SSDB
Motif
Pfam: SBP_bac_5 TAT_signal
Other DBs
NCBI-ProteinID: AVQ83761
UniProt: A0A2P1VF25
Position
1:complement(5125568..5127055)
AA seq 495 aa
MLNRRTLLTTAGATVALATPLAGMAQGRKDAIVIGMALEPPGLDPTSGAAAAIAEVVQYN
ILETLTKINADGSVTPLLADSWEVSPDLKTYTFKLKRGVKYQNGEPFNAAAVKFSFDRAG
SEKSTNKDKRTFANLSTQVVDDYTVVVINKEIDPDLPFVLGQATAVIVEPKSAEGNATKP
VGTGPYKLDNWAKGSSITLSKWEGFRSPATAKINKVTFRFISDTAAQAAAVLSGDIDVFP
RIGTRVVPQFKMNPQFQVILAGSRAKTILSINNRKKPLDDVRVRRAILAAIDRKAVIEGA
ADGFGVPIGSHYVPGAAGYVDTTAINPFDIEKAKKLLAEAGVKTPLELKMTLPPPPYARQ
GGEVIVAQLAKIGIVVKVQNVEWAQWLSGTYGNKDYDLSIVSHVEPFDLGNYAKSDYYWG
YQSKAFDTLFDKIKTTANTAERNKLLGDAQKMLATDAANGFLYQPQFPTVAKKNVKGIWK
ENPIFVNDLSALSWG
NT seq 1488 nt   +upstreamnt  +downstreamnt
atgttgaaccgccgcaccctcctcaccaccgccggcgccaccgttgcgctggccaccccg
ctcgccggcatggcgcagggcaggaaggacgccatcgtgatcggcatggcgctcgagccg
ccgggcctggaccccaccagcggcgccgccgccgccatcgcggaagttgtgcagtacaac
atcctggaaacgctcaccaagatcaacgccgacggcagcgtcacgccgctgctggccgac
agctgggaagtctcgcccgacctgaagacctacaccttcaagctcaagcgcggcgtgaag
taccagaacggcgagcccttcaacgcggccgcggtcaagttctcgttcgaccgcgccggc
agcgagaagagcaccaacaaggacaagcgcaccttcgccaacctgagcacccaggtggtc
gacgactacaccgtggtggtcatcaacaaggaaatcgaccccgacctgcccttcgtgctg
ggccaggccacggccgtgatcgtggagcccaagagcgccgagggcaatgccaccaagcca
gtcggcaccggcccctacaagctcgacaactgggccaagggctcgtcgatcacgctgagc
aagtgggaaggcttccgcagccccgccaccgccaagatcaacaaggtcaccttccgcttc
atctccgacaccgcggcgcaggccgcggcggtactgtcgggcgacatcgacgtgttcccg
cgcatcggcacgcgcgtggtgccgcagttcaagatgaacccgcagttccaggtgatcctg
gccggctcgcgcgccaagaccatcctgtcgatcaacaaccgcaagaagccgctggacgac
gtgcgcgtgcgccgcgccatcctcgcggccatcgaccgcaaggccgtgatcgaaggcgcc
gcggatggcttcggcgtgcccatcggcagccactacgtgccgggcgcggcgggctatgtc
gacaccaccgccatcaaccccttcgacatcgagaaggccaagaagctgctggccgaagcc
ggcgtgaagacgccgctcgaactcaagatgacgctgcccccgccgccctacgcgcgccag
ggcggcgaggtgatcgtggcccagctggccaagatcggcatcgtggtgaaggtgcagaac
gtcgagtgggcgcagtggctcagcggcacctacggcaacaaggactacgacctgtcgatc
gtgtcgcacgtggagcccttcgacctcggcaactacgccaagtcggactactactggggc
taccagtcgaaggccttcgacacgctgttcgacaagatcaagaccaccgccaacaccgcg
gagcgcaacaagctgctcggcgacgcgcagaagatgctggccaccgacgcggccaacggc
ttcctctaccagccgcagttcccgaccgtggcgaagaagaacgtcaagggcatctggaag
gaaaacccgatcttcgtgaacgacctgtcggcgctgtcgtggggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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