KEGG   Variovorax sp. PMC12: C4F17_25175Help
Entry
C4F17_25175       CDS       T05380                                 

Definition
(GenBank) methionine--tRNA ligase
  KO
K01874  methionyl-tRNA synthetase [EC:6.1.1.10]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00450  Selenocompound metabolism
vam00970  Aminoacyl-tRNA biosynthesis
vam01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    C4F17_25175
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    C4F17_25175
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:vam01007]
    C4F17_25175
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vam03016]
    C4F17_25175
Enzymes [BR:vam01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.10  methionine---tRNA ligase
     C4F17_25175
Amino acid related enzymes [BR:vam01007]
 Aminoacyl-tRNA synthetase
  Class I (U)
   C4F17_25175
Transfer RNA biogenesis [BR:vam03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    C4F17_25175
 Prokaryotic type
   Other AARSs
    C4F17_25175
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: tRNA-synt_1g tRNA_bind tRNA-synt_1 tRNA-synt_1f tRNA-synt_1e Anticodon_1
Motif
Other DBs
NCBI-ProteinID: AVQ83974
UniProt: A0A2P1VFP3
Position
1:complement(5362932..5365031)
Genome map
AA seq 699 aa AA seqDB search
MSAPRKLFVTTALPYANGKFHIGHMMEYIQADIWVRNQRMNGAEVNFVCADDAHGAAITI
AADKAGVTPQAFVAEIAAGRKPYLDGYYISFDNWHSTDAPENHQLAQDIYRDLRANGLIS
TKSVEQFYDPEKGMFLADRFIKGECPNCHSKDQYGDNCEVCGAVYAPTELINPYSALSGA
KPELRSSEHFFFKLSDPRCEAYLKEWTAAPGHVQSEVQNKIREWLYKDDEGKGGLGDWDI
SRDAPYFGIEIPDAPGKYFYVWLDAPVGYLASLKNLLDKRCIELGGDGISYTEYMADPDL
EQVHFIGKDIITFHTLFWPAMLHFSGRKAPDAVYVHGHLTVSGEKMSKSRGTGIDPLKYL
SIGLDPEWLRYYIAAKLNGRNEDIDFNPEDFVARVNSDLVGKYINIASRAAGFIGKRFGG
RLGEVSADGDALLFTLRDAATQIHTLYDGRDYARALREVMALADKVNEYVDQNKPWELAK
KEGAEARLHDVCTVCIEAFRLLTLYLKPVLPALALNVEAFLKTSPLVWADAAQSLPAGHA
IGDYKHLMQRADPKQVDKLFDAPEAPAAAPAAATEAQELPGGEAIAPAITIDDFAKIDLR
IAKIVACEKVEGSTKLLRLTLDAGEGKTRNVFSGIASAYQPEQLVGKLTVLVANLAPRKM
KFGISEGMVLAASHGDEKAHPGIHVLEPWPGATPGMRVR
NT seq 2100 nt NT seq  +upstreamnt  +downstreamnt
atgtccgccccgcgcaagctcttcgtcaccaccgccctgccgtacgccaacggcaagttc
catatcggccacatgatggaatacatccaggccgacatctgggtgcggaaccagcggatg
aacggcgccgaggtcaacttcgtctgcgccgacgacgcgcacggcgcggccatcaccatc
gcggccgacaaggccggcgtgacgccgcaggccttcgtggccgagattgcggccgggcgc
aagccgtatctcgacggctactacatctccttcgacaactggcactcgaccgacgcgccc
gagaaccaccagctcgcgcaggacatctaccgcgacctgcgggccaacggcctgatcagc
accaagagcgtcgagcagttctacgaccccgaaaagggcatgttcctggccgaccgcttc
atcaagggcgagtgccccaactgccattcgaaggaccagtacggcgacaactgcgaggtg
tgcggcgccgtgtacgcgcccaccgagctgatcaatccctactcggccctgtcgggcgcc
aagcccgagctgcgcagctcggagcacttcttcttcaagctctccgacccgcgctgcgag
gcctacctgaaggaatggaccgccgcccccggccacgtgcagtccgaggtgcagaacaag
atccgcgaatggctctacaaggacgacgagggcaagggcggcctcggcgactgggacatc
agccgcgacgcgccgtacttcggcatcgagatccccgatgcgccgggcaagtacttctac
gtgtggctcgacgcccccgtgggctacctggcgtcgctgaagaacctgctggacaagcgc
tgcatcgaactcggcggcgacggcatctcgtacaccgagtacatggccgaccccgacctc
gagcaggtgcacttcatcggcaaggacatcatcaccttccacacgctgttctggcccgcg
atgctgcacttcagcggccgcaaggcgcccgacgccgtgtacgtgcacggccacctcacg
gtgagcggcgagaagatgagcaagagccgcggcaccggcatcgacccgctcaagtacctg
tcgatcgggctcgaccccgaatggctgcgctactacatcgccgccaagctcaacggccgc
aacgaagacatcgacttcaaccccgaggacttcgtggcgcgcgtcaacagcgacctcgtg
ggcaagtacatcaacatcgccagccgcgcggcgggcttcatcggcaagcgcttcggcggc
aggctgggcgaggtgtcggcagacggcgacgcgctgctgttcacgctgcgcgacgcggcc
acccagatccacacgttgtacgacggccgcgactacgcccgcgccctgcgcgaggtgatg
gcgctggccgacaaggtgaacgagtacgtcgaccagaacaagccctgggagctggccaag
aaggaaggcgccgaggcgcgcctgcacgacgtgtgcaccgtgtgcatcgaggccttccgc
ctgctcacgctgtacctgaagccggtgctgccggcgctggcgctgaacgtcgaggccttc
ctgaagacctcgccgctggtctgggccgacgcggcgcagtctctgcccgcgggccacgcc
atcggcgactacaagcacctgatgcagcgcgccgaccccaagcaggtcgacaagctgttc
gatgcgcccgaggcacccgctgcggcacccgccgccgcgacggaagcccaggagctgccc
ggcggcgaagccatcgcgcccgccatcaccatcgacgacttcgcgaagatcgacctgcgc
atcgcgaagatcgtggcctgcgagaaggtcgaaggctcgaccaagctgctgcgcctgacg
ctcgacgcgggcgaaggcaagacccgcaacgtgttcagcggcatcgcctcggcctaccag
cccgagcagctagtgggcaagctcacggtgctggtcgccaacctcgcgccgcgcaagatg
aagttcggcatcagcgaaggcatggtgctggccgcgagccacggcgacgaaaaggcccac
cccggcatccacgtgctggagccgtggccgggcgcgacgccgggcatgcgcgtgcgctga

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