KEGG   Variovorax sp. PMC12: C4F17_28035
Entry
C4F17_28035       CDS       T05380                                 
Name
(GenBank) branched-chain amino acid ABC transporter substrate-binding protein
  KO
K01999  branched-chain amino acid transport system substrate-binding protein
Organism
vam  Variovorax sp. PMC12
Pathway
vam02010  ABC transporters
vam02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vam00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    C4F17_28035
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    C4F17_28035
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vam02000]
    C4F17_28035
Transporters [BR:vam02000]
 ABC transporters, prokaryotic type
  Phosphate and amino acid transporters
   Branched-chain amino acid transporter
    C4F17_28035
SSDB
Motif
Pfam: Peripla_BP_6 Peripla_BP_5 ANF_receptor CW_binding_2
Other DBs
NCBI-ProteinID: AVQ84916
UniProt: A0A2P1VIC4
Position
2:113465..114643
AA seq 392 aa
MTIKFVAALAVSLATISFQSRADVIKVGVIAPMSGPFSVVGQTWEGATKAYQKLNGTTVG
KHTIEVVYRDLPEINPAQAKALAQELIVKEGAQYIAGLYFTPDTLAVAALAQEAKVPVVI
FNASTSSLLDKSDFLLRTSYTLPQMAVPVAKYALEKSVRNVVTLVSDFGPGLDAEKSFTT
AFIGGGGKLLEAIRAPLKTTDFGPLMQRVKALKPDALYVFAPGGPSTYAMVKAYNEAGLR
TAGVRFLGTAETDEDQLRAIGPELLGIETGMFYSATHNSALNNALIKAFGEVAPKAIPTV
QLANAYDGLHVIYRMVQATDGQRDGVKALASAKGYAWESPRGPVKIDPTSREFVQNVYMR
VVEKDPSGRFVNREFRTFEMQPDYGRTQNVSK
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgaccatcaaatttgttgccgccctggcggtttccctcgcgacgatctcctttcagtcc
cgtgccgacgtcatcaaggtgggcgtcatcgcgccgatgtccgggccgttttcggtcgtg
gggcaaacctgggagggtgcgaccaaggcctatcagaagctcaacggcacgaccgtgggc
aagcacacgatagaagtcgtctaccgcgaccttcccgagatcaaccctgcgcaggccaag
gcgctggcacaggaactgatcgtcaaggaaggtgcgcagtacatcgctggcctttacttc
acgcccgacaccctggccgtggctgcgctagcgcaggaggccaaagtaccggtcgtgatc
ttcaatgcatccacgtcgtcgctgctcgacaagtctgacttcctgctgcgcacttcatac
accctgccgcagatggcggtgcccgtggccaagtacgcgctcgagaaaagcgtccgcaat
gtcgtcacgctggttagcgacttcggtcctggcctggacgccgagaaatccttcaccacg
gccttcatcggcggcggcggcaagctgctcgaggccatccgcgcgccgttgaagacaacc
gatttcggtccgctgatgcagcgcgtgaaggcgctcaagcccgatgccctctacgtcttc
gccccgggtggcccttcgacctatgcgatggtcaaggcctacaacgaggccggcctcaga
actgccggcgtgcgctttctcggcaccgccgagaccgatgaggaccagctgcgggccatc
ggcccagagcttctcggcatcgagaccggcatgttctattcggccacgcacaactcggcg
ctgaacaacgccctcatcaaggcattcggcgaggttgcacctaaggctattccgaccgtt
cagctcgccaacgcctacgacggcctccacgtgatctatcgcatggtccaggccaccgat
gggcagcgcgatggggtcaaggcgctcgccagcgccaaggggtacgcgtgggagagtccg
cgaggcccggtgaagatcgacccgacttcccgcgagttcgtgcaaaacgtctacatgcgc
gtggtcgagaaagacccgtcagggcgcttcgtgaaccgcgaattccgcacgttcgagatg
cagcccgattacggccgcacccagaacgtgtccaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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