KEGG   Vibrio anguillarum 775: VAA_02412
Entry
VAA_02412         CDS       T01536                                 
Name
(GenBank) DNA helicase II
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
van  Vibrio anguillarum 775
Pathway
van03420  Nucleotide excision repair
van03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:van00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    VAA_02412
   03430 Mismatch repair
    VAA_02412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:van03400]
    VAA_02412
Enzymes [BR:van01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     VAA_02412
DNA repair and recombination proteins [BR:van03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     VAA_02412
   MMR (mismatch excision repair)
    Other MMR factors
     VAA_02412
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 PcrA_UvrD_tudor UvrD_C_2 AAA_30 AAA_12 AAA_11 PhoH
Other DBs
NCBI-ProteinID: AEH31928
Position
I:356840..359014
AA seq 724 aa
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLISVENASPFSVMS
VTFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDARLPEDFQILDSEDQ
LRLLRRLIKAQNLDEKQWPTRQVCWWINGKKDEGLRPKHIDAYRDPVTQTYLQLYSAYQE
ACDRAGLVDFAEILLRCHEMLRDKQHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGR
DCHVMIVGDDDQSIYGWRGAKIENLEKFTQEFPSVNTIRLEQNYRSTKTILQASNALIAN
NTERMGKELWTDGSEGEPISIYSAYNDLDEARFTVNKIKEWRDKGGALEDCAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMSNRNDDSAFERVVNTPPRGLG
DKTLETIRFAARDRGCTLWQASLVLLEEKVLTGRAASALSRFIELVNALEDDSAEMPLHS
QTDHVIKTSGLFEMYQLEKGEKSKARIENLEELVTATRQFEKPEEADEMSMLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEIRRLYGQDKYHKPSRFIRELPENCLDEVRMKAQVSRPSSAGRF
SQTAVKENFNETGFSLGARVKHPIFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAK
LEKL
NT seq 2175 nt   +upstreamnt  +downstreamnt
atgatggatccttctctcttactcgacggtctcaacgataaacagcgcgaagcggttgcc
gcgcctttagaaaacttgctggtgcttgccggagcggggagtggtaaaacccgagtattg
gtgcatcgcattgcttggcttatctcggttgaaaacgcctcgcctttttcagtgatgtcg
gtgacttttaccaacaaagcggcggcggaaatgcgtggccgaattgaagagttgatgatg
ggcagcgcatcgggcatgtggaatggtaccttccacggtatttgccaccgtattttacgc
gctcactatcttgacgctcgcctgcctgaggattttcagatcctcgattctgaagatcaa
ctgcgtttgctgcgtcgtttaatcaaagcacaaaacctagatgagaagcagtggcctacg
cgccaggtgtgctggtggattaacggtaaaaaagatgaaggtcttcgtccgaagcacatc
gatgcgtaccgcgatcccgtgactcaaacctatttgcagctttattccgcgtaccaagag
gcgtgcgatcgcgcaggtttggttgattttgccgaaattttgctgcgttgccacgagatg
ttgcgtgataagcagcacattcgtgaacattatcaagcgcgctttaaacacatcttggtc
gacgaatttcaagacaccaataacatccaatacgcgtggctgcgcatgatggctgggcgc
gattgccacgtgatgatcgtcggtgatgatgatcagtccatttatggctggcgtggtgcc
aaaattgaaaacctcgaaaaattcacgcaggaatttccgagcgttaataccattcgttta
gagcaaaactaccgttcaaccaaaaccattttgcaagcctcgaacgcactgatcgcgaac
aacaccgagcgaatgggtaaagagctctggacagatggcagcgaaggcgagccaatttct
atctattcggcctacaacgatcttgatgaggcgcgttttaccgtcaataaaatcaaagag
tggcgagataaaggtggcgcattagaggattgtgcgatgctttatcgcaacaacgcccaa
tctcgtgttttggaagaagccttgattcaagcaggcttgccctatcgcatctacggcggc
atgcgcttcttcgagcgccaagagatcaaagatgcgttaagttacttgcgtttgatgtct
aaccgcaatgatgattcggcctttgagcgagtcgtaaatacgccaccgcgtggcttgggt
gataaaacgctggaaaccattcgttttgcggcgcgagatcgcggttgtaccttgtggcaa
gcgagccttgtgctgttggaagaaaaagtgctcacaggacgtgcggcaagcgcattaagc
cggtttattgagctggtcaatgcccttgaagatgatagcgctgagatgccgttacacagt
caaaccgaccatgtaatcaaaacctctggcttgtttgagatgtatcagcttgaaaagggt
gaaaagtccaaagccagaattgaaaacttggaagaactagtcaccgcaacacgccaattt
gaaaagccagaagaagcggatgagatgagcatgttgacggcctttttaacccacgcagcg
ctggaagcgggcgaagggcaggctgacgaatttgatgatgccgtacagttaatgacactg
cacagcgcgaaagggttagagttcccgttggtgtttatggttggcgttgaagagggcatg
ttccccagccaaatgtcggccgaagaagcggggcgattggaagaggagcgccgtttgtgt
tacgtcggaatgacgcgcgccatgcaaaagctctacattacttacgctgaaattcgccgt
ttatacggtcaggataaataccataagccgtcacgctttatccgtgagctgccagaaaac
tgccttgatgaagtgcgcatgaaagcgcaagtgagccgaccaagcagtgccgggcgtttt
agtcaaacagcggtcaaagagaactttaacgagacgggctttagcttgggcgcacgcgtg
aaacaccctatttttggtgaaggcaccatcattaatttcgaaggtagtggtccgcaaagt
cgagtgcaagtcgcttttaacggtgaaggcattaaatggctagtgactgcttatgccaag
ctagagaaactatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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