KEGG   Variovorax paradoxus S110: Vapar_0415
Entry
Vapar_0415        CDS       T00916                                 
Name
(GenBank) 1,4-alpha-glucan branching enzyme
  KO
K00700  1,4-alpha-glucan branching enzyme [EC:2.4.1.18]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00500  Starch and sucrose metabolism
vap01100  Metabolic pathways
vap01110  Biosynthesis of secondary metabolites
Module
vap_M00565  Trehalose biosynthesis, D-glucose 1P => trehalose
vap_M00854  Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00500 Starch and sucrose metabolism
    Vapar_0415
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vap04147]
    Vapar_0415
Enzymes [BR:vap01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.1  Hexosyltransferases
    2.4.1.18  1,4-alpha-glucan branching enzyme
     Vapar_0415
Exosome [BR:vap04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Vapar_0415
SSDB
Motif
Pfam: CBM_48 Alpha-amylase_C Alpha-amylase AMPK1_CBM
Other DBs
NCBI-ProteinID: ACS17078
UniProt: C5CJ78
Position
1:complement(450146..452317)
AA seq 723 aa
MPSLLLPEREVHALMRAEHGDPFAVLGPHETRDGLLVRALLPGAQSVAVVHTRTGWPLAL
LSRQEGSDLFAGLVPAAEALLGYSFQVDWGTHSSRLEDPYRFAFVLGATDVWLLAEGTHL
RPWERLGAHLCEMDGVKGVAFAVWAPNARRVSVVGDFNNWDGRRHMMRLRRECGVWEIFA
PQLATGDSYEFEILSAQGEVLRKADPFAFSSRLRPETACVVAPLPAPVAMPPERAAANGR
HAPMSIYEVHLGSWRRKNGHEWLDYRELADTLVPYARDMGFTHIELLPVSEHPFDGSWGY
QPIGLYAPTSRFGTPGDFRHLVEAAHAAGLGVILDWVPAHFPTDAHGLGRFDGTALYEYA
DPREGFHNDWKTFIFNYGRTEVRNYLVGNALYWLERYGVDGLRVDAVASMLYRDYSRQPG
EWVPNIHGGRENLEAIDFLRRMNRVVGVERPGAITLAEESTSFPGVTRPPEDGGLGFHYK
WNMGWMNDTLAYAGIDPVHRKHHHQKITFGLMYAHSENFVLPLSHDEVVHGKGSMFGRMP
GDEWQKFAGLRNLYGYLWAYPGKKLLFMGNEFAQVAEWNADRSLDWHLLEQAPHQGMRRL
VRDLNNVYRHFPALHELDTERAGFEWLVHDDREQSVFAFVRRAQGGSFVVAVCNFTPLPR
HGYRLGVPAAGAYREAINTDGAVYGGSGVGNGVVDSEPVPWHGRADSILISVPPLATVMW
VLA
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgccttccctgctgctgcccgaacgcgaagtgcacgcgctgatgcgcgccgagcacggc
gatccgttcgcggtgctcggtccgcacgagacgcgcgacggcctgctggtgcgcgcgctg
ctgccgggcgcgcagagcgtggccgtggtgcacacgcgcacgggctggccgctggcgctg
ctgtcgcggcaggaaggctccgatctttttgccggactggtgcccgcggccgaggcgctg
ctgggctattcgttccaggtcgactggggcacgcacagctcgcggctcgaagacccgtac
cgctttgcgttcgtgctgggtgccaccgacgtatggctgctggccgagggcacgcacctg
cgaccctgggagcggctgggcgcacacctgtgcgagatggatggcgtcaagggcgtggcc
ttcgcggtctgggcgcccaatgcgcggcgcgtctcggtggtcggcgacttcaacaactgg
gacggccggcgccacatgatgcggctgcgccgcgaatgcggcgtgtgggaaatcttcgcg
ccgcagctggccacgggcgacagctacgaattcgagatcctctcggcccagggcgaggtg
ctgcgcaaggccgatcccttcgccttctcctcgcgcctgcggcccgagaccgcctgcgtg
gtcgcgccgctgcccgcgcccgtcgccatgccgcccgaacgcgccgccgccaacggccgc
catgcgccgatgagcatctacgaggtgcacctgggctcctggcgccgcaagaacggccat
gaatggctggactaccgcgagctggccgacacactggtgccgtacgcgcgcgacatgggc
ttcacgcacatcgagctgctgccggtcagcgagcatccgttcgacggctcctggggctac
cagccgatcggcctgtatgcgcccacctcgcgcttcggcacgcccggcgacttccgccat
ctggtcgaagccgcgcatgccgcgggcctgggcgtgatcctcgactgggtgcccgcgcac
ttccccaccgacgcgcacggcctgggccgcttcgacggcaccgcgctctatgaatacgcc
gatccgcgcgagggcttccacaacgactggaagaccttcatcttcaactacggccgcacc
gaggtgcgcaactacctggtcggcaatgcgctgtactggctcgagcgctacggcgtcgac
ggactgcgcgtcgacgccgtggcctccatgctctaccgcgactacagccgccagcccggc
gaatgggtgcccaacatccacggcgggcgcgagaatctcgaggccatcgacttcctgcgg
cgcatgaaccgggtggtgggcgtcgagcgcccgggcgccatcacgctggccgaggagtcc
acgagctttccgggcgtgacgcggccgcccgaggacggcggcctgggcttccactacaaa
tggaacatgggctggatgaacgacacgctcgcctatgcgggcatcgacccggtccaccgc
aagcaccaccaccagaagatcaccttcggcctgatgtatgcgcacagcgagaacttcgtg
ctgccgctctcgcacgacgaggtggtgcacggcaagggctcgatgttcggccgcatgccc
ggcgacgagtggcagaagttcgcggggctgcgcaatctttatggctacctctgggcctat
ccgggcaagaagctgctgttcatgggcaatgaattcgcccaggtggcggaatggaacgcc
gaccgcagcctcgactggcacctgctcgagcaggcgccgcaccagggcatgcggcggctg
gtgcgcgacctcaacaacgtgtaccggcacttccccgcgctgcacgagctcgacaccgaa
agggccggcttcgagtggctggtgcatgacgaccgggagcagtcggtcttcgccttcgtg
cgccgggcccagggcggctccttcgtggtggcggtgtgcaacttcacgccgctgccgcgc
cacggctaccggcttggcgtgcccgcggcgggcgcctaccgcgaggccatcaacaccgac
ggcgccgtgtacggcggcagcggtgtcggcaacggcgtggtcgacagcgaaccggtgccc
tggcacggccgggccgattcgattctcatcagcgtgccgcccctggccaccgtgatgtgg
gtgctggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (3)   
   KEGG MODULE (2)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (34)   

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