KEGG   Variovorax paradoxus S110: Vapar_0853
Entry
Vapar_0853        CDS       T00916                                 
Name
(GenBank) extracellular solute-binding protein family 5
  KO
K02035  peptide/nickel transport system substrate-binding protein
Organism
vap  Variovorax paradoxus S110
Pathway
vap02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:vap00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Vapar_0853
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:vap02000]
    Vapar_0853
Transporters [BR:vap02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Vapar_0853
SSDB
Motif
Pfam: SBP_bac_5
Other DBs
NCBI-ProteinID: ACS17506
UniProt: C5CMK5
Position
1:complement(940083..941741)
AA seq 552 aa
MKRAVPASILKPLAACAVLATLAFATPALAQEKTLRIAMTAADIPRTLGQPDQGFEGNRF
TGIPIYDSLTQWDLSKADAPSVLIPALASSWAVDAKDKTRWVFKLRPGVKFHDGSAFNAD
AVVWNVQKVLDKDAPQFDPSQVGVTASRMPTLRTARKIDDMTVELTTSEPDAFLPINLSN
LFMASPAQWQKKFDAAAGATPADKSKAAWTAFAADPAGSGPFKVTRFVARERLELAANKT
YWDAKRVPKIDKVVMLPMPEANARTAALLGGQVDWIEAPAPDAMAQITQRGFKIYSNAQP
HVWPWQLSFAEGSPWLDKRVRQAANLCIDRGGMKQLLGGMMAEPKGTVPPGHPWFGTPAF
DIRYDVKAAQALMTQAGYSAAKPIKVKVQISASGSGQMQPLPMNEFAQQSLKQCFFDVQF
DVIEWNTLFTNWRKGSKDPSANGANAVNISFAAMDPFFAMVRFVSTKAFPPVSNNWGYYG
NAEVDKLVADARTSFDDKARDAALARLHTHIVDDAPFVWIAHDVGPRAMSAKVKNVVQPK
SWFIDIATMTMD
NT seq 1659 nt   +upstreamnt  +downstreamnt
gtgaagcgtgccgttcctgcctcgatcctgaaacccctggccgcctgcgcggtgctcgcc
accctggccttcgcaacgccggccctggcccaggagaagacgctgcgcatcgccatgacc
gcggccgacattccgcgcacgctcggccagcccgatcagggcttcgagggcaaccgcttc
accggcatcccgatctacgactcgctcacccagtgggacctgtccaaggccgacgcgccg
agcgtgctgatcccggcgctggccagttcctgggcggtcgacgccaaggacaagaccagg
tgggtcttcaagctgcgccccggcgtcaagttccatgacggctcggccttcaatgccgat
gcggtggtgtggaacgtgcagaaggtgctcgacaaggacgcgccgcagttcgaccccagc
caggtcggtgtgaccgcttcgcgcatgcccacgctgcgcaccgcgcgcaagatcgacgac
atgacggtcgagctcaccaccagcgagcccgacgccttcctgccgatcaacctgagcaac
ctgttcatggcctcgcccgcgcagtggcagaagaagttcgatgccgcggccggcgccacg
cccgccgacaagtccaaggccgcatggaccgccttcgccgccgaccccgcaggatcgggc
ccgttcaaggtcacgcgcttcgtggcgcgcgaacgcctggagctggccgccaacaagacc
tactgggacgcgaagcgcgtacccaagatcgacaaggtcgtgatgctgccgatgcccgag
gccaatgcgcgcaccgccgcgctgctgggcggccaggtcgactggatcgaggcgcccgcg
cccgatgccatggcgcagatcacgcagcgcggcttcaagatctattccaacgcgcagccg
catgtgtggccgtggcagctgtcgtttgccgagggctcgccctggctcgacaagcgcgtg
cgccaggccgccaacctgtgcatcgaccgcggcggcatgaagcagctgctcggcggcatg
atggctgagcccaagggcacggtgccgccgggccatccgtggttcggcacgcccgccttc
gatatccgctacgacgtgaaggccgcgcaggcgctgatgacgcaggccggctactcggcg
gccaagccgatcaaggtcaaggtgcagatctccgcctcgggctcgggccagatgcagccg
ctgccgatgaacgagttcgcgcagcagtcgctcaagcagtgcttcttcgacgtgcagttc
gacgtgatcgaatggaacacgctcttcaccaactggcgcaagggctcgaaggacccgtcg
gccaatggcgccaacgcggtcaacatcagcttcgcggcgatggacccgttcttcgcgatg
gtgcgcttcgtgagcaccaaggcctttccgccggtgtccaacaactggggctactacggc
aacgccgaagtcgacaagctggtggccgatgcgcgcaccagcttcgacgacaaggcgcgc
gacgctgcgctggccaggctgcatacgcacatcgtggacgacgcgcccttcgtctggatc
gcgcacgacgtggggccgcgcgcgatgtcggccaaggtgaagaacgtggtgcagccgaaa
agctggttcatcgacatcgcaaccatgacgatggactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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