KEGG   Variovorax paradoxus S110: Vapar_1569
Entry
Vapar_1569        CDS       T00916                                 
Name
(GenBank) exodeoxyribonuclease VII, small subunit
  KO
K03602  exodeoxyribonuclease VII small subunit [EC:3.1.11.6]
Organism
vap  Variovorax paradoxus S110
Pathway
vap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Vapar_1569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vap03400]
    Vapar_1569
Enzymes [BR:vap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Vapar_1569
DNA repair and recombination proteins [BR:vap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Vapar_1569
SSDB
Motif
Pfam: Exonuc_VII_S
Other DBs
NCBI-ProteinID: ACS18220
UniProt: C5CT95
Position
1:1696412..1696678
AA seq 88 aa
MPKVPSSATSSPAATPDTGPLPASYEAGLQELEQLVAELESGQLPLDQLLGSYQRGAALL
AFCREKLQAVEDQIKVLDAGSLKPWTAE
NT seq 267 nt   +upstreamnt  +downstreamnt
atgcccaaggtcccttcttccgccacgtccagcccggccgccacgcccgacacggggccg
ctgccggccagctacgaagccgggctccaggagttggaacaattggttgcagaactcgag
tcgggccaattgccgctcgaccagctgctcggcagctaccagcgcggcgccgcgctgctc
gccttctgccgcgaaaagctccaggcggtcgaagaccagatcaaggtgctcgacgccggg
agcctcaagccctggactgccgaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (13)   

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