KEGG   Variovorax paradoxus S110: Vapar_2571
Entry
Vapar_2571        CDS       T00916                                 
Name
(GenBank) endonuclease III
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
vap  Variovorax paradoxus S110
Pathway
vap03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Vapar_2571
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vap03400]
    Vapar_2571
Enzymes [BR:vap01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Vapar_2571
DNA repair and recombination proteins [BR:vap03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Vapar_2571
 Prokaryotic type
     Vapar_2571
SSDB
Motif
Pfam: HhH-GPD HHH EndIII_4Fe-2S RecR_HhH HHH_8
Other DBs
NCBI-ProteinID: ACS19197
UniProt: C5CKP3
Position
1:complement(2714172..2714819)
AA seq 215 aa
MKKDNIPLFFATLQAANPTPETELEYATPFELLAAVLLSAQATDVGVNKATRKLFPVANT
PQAILRLGVEGLEDYIKTIGLYRSKAKHLIETCRILVEKHGGEVPRTRAELEALPGVGRK
TANVVLNVAFGEATIAVDTHIFRVSNRTGLAPGKTPLEVELKLEKRVPFEFRLHAHHWLI
LHGRYICVARTPKCWECAVAPFCDYKPKTPRPKSA
NT seq 648 nt   +upstreamnt  +downstreamnt
atgaaaaaagacaacatccccctcttcttcgccaccctgcaggcggccaaccccaccccc
gaaaccgagctcgaatacgccacgccattcgaactgctggccgccgtgctgctctcggcg
caggcgaccgacgtgggcgtgaacaaggccacgcgcaagctgtttccggtggcgaacacg
ccgcaggcgatcctcaggctgggcgtggagggcctggaggactacatcaagaccatcggg
ctgtaccgcagcaaggccaagcacctgatcgagacctgccgcatcctggtggaaaagcac
ggcggcgaagtgccccgtacgcgcgccgagctcgaggcgctgccgggcgtcggccgcaag
accgccaacgtggtgctcaacgtggcgttcggcgaagcgacgatcgcggtcgacacgcac
atcttccgcgtcagcaaccgcaccgggctcgcgccgggcaagacgccgctcgaagtggag
ctcaagctggagaaacgcgtgccgttcgaattccggctgcatgcgcaccactggctcatc
ctgcatgggcgctacatctgcgtggcacgcacgccgaagtgctgggaatgcgcggtggca
cccttttgcgactacaagccgaagacgccgcggcccaagtcggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (19)   

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