KEGG   Variovorax paradoxus S110: Vapar_2623
Entry
Vapar_2623        CDS       T00916                                 
Name
(GenBank) ribosomal RNA methyltransferase RrmJ/FtsJ
  KO
K02427  23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vap03009]
    Vapar_2623
Enzymes [BR:vap01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.166  23S rRNA (uridine2552-2'-O)-methyltransferase
     Vapar_2623
Ribosome biogenesis [BR:vap03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    Vapar_2623
SSDB
Motif
Pfam: FtsJ Methyltrans_Mon_2nd
Other DBs
NCBI-ProteinID: ACS19248
UniProt: C5CKU4
Position
1:2767241..2767909
AA seq 222 aa
MSTKAKSKKVNKAWLHDHINDPYVKLATREGYRARAAYKLKEIDESLGLVKPGQLVVDLG
STPGAWSQYLRRRMSPEGAAAGELNGTIIALDILPMEPIEGVTFLQGDFREAELLEQVLG
VLAGRKADLVVSDMAPNLSGIHSADAARVAHLIELAIDFAQHHLKPEGALVAKLFHGSGY
DELVKLFKANFRTVKPFKPKASRDKSSETFLVGMGLKAQETL
NT seq 669 nt   +upstreamnt  +downstreamnt
atgagcaccaaagccaaaagcaaaaaagtcaacaaagcctggctgcacgaccacatcaac
gacccgtatgtgaaactggccacgcgcgagggataccgcgcacgcgccgcctacaagctc
aaggaaatcgacgaatcgctcgggctggtcaagccgggccagctggtggtcgacctgggt
tccacgcccggagcctggagccagtacctgcgccggcgcatgtcgcccgagggcgccgcg
gccggcgagctgaacggcaccatcattgcgctggacatcctgccgatggagccgatcgag
ggcgtgaccttcctgcagggcgatttccgcgaggcggaactgctggaacaggtgctgggc
gtgctggccggccggaaggccgacctggtggtttccgacatggccccgaacctgtcgggc
atccattcggccgatgcggcccgcgtggcgcacctgatcgagctggccatcgactttgcc
cagcaccacctgaagcccgagggggcactggtggccaagctcttccatggcagcggctat
gacgagctggtgaagctgttcaaggcgaacttccgcaccgtgaagcccttcaaacccaag
gcctcgcgtgacaaatcatcggaaaccttccttgtcggcatgggtctgaaggctcaggaa
acgctttga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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