KEGG   Variovorax paradoxus S110: Vapar_2644
Entry
Vapar_2644        CDS       T00916                                 
Name
(GenBank) exodeoxyribonuclease VII, large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
vap  Variovorax paradoxus S110
Pathway
vap03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vap00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    Vapar_2644
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vap03400]
    Vapar_2644
Enzymes [BR:vap01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     Vapar_2644
DNA repair and recombination proteins [BR:vap03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     Vapar_2644
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon Apolipoprotein
Other DBs
NCBI-ProteinID: ACS19269
UniProt: C5CKW5
Position
1:2787226..2788536
AA seq 436 aa
MNLRDSNPTPGPRIWAVGALCRAVADALDARFNPVAVRGEISGFSRASSGHCYFALKDSS
GQLRCAMFRRAAGLLDFSPRDGDQVEVRGRLAVYEPRGDLQLVVESLQRAGQGALFEQFL
QRKARLEAEGLFDPERKRALPVMPRAVGLVTSLGAAALHDVVTALRRRVPHIPVVLAPAA
VQGANAPAELVRALQSLYALEPAVDVILLVRGGGSIEDLWAFNDEALARTIVQSPVPLIC
GVGHETDFTIADFCADLRAPTPTAAAELVSAPQAMWLGAIDLLDERLDSALGARLDVLGQ
RLDQAAARLGRPSGLVARQQLRLAHHSQRLRYALLSRAERLAQVPRAIAADFPLRLERAM
AQRRERLERVALRLRLLDPALVLQRGYAWLTDPDGRAIVSAKKLSPGDAVVARLADGSVD
LAVVPGKTGTRPTPGA
NT seq 1311 nt   +upstreamnt  +downstreamnt
gtgaacctgcgtgactcgaatccaacgccgggcccgcggatctgggctgtgggcgcgctg
tgccgggcggtggccgacgcgctcgatgcgcgcttcaacccggtcgcggtgcgcggcgag
atttccggcttctcgcgcgcgtcgagcggacattgttacttcgcgctcaaggattcgtcc
ggccagctgcgctgcgcgatgttccggcgcgccgcgggcctgctcgatttttcgccgcgc
gacggcgaccaggtcgaagtgcgcgggcggctcgcggtgtacgaaccgcgcggcgacctg
caactggtggtcgaaagcctgcagcgcgccggccagggcgcgctgttcgagcaattcctg
cagcgcaaggcgcggctcgaggccgaagggctcttcgatccggagcgcaagcgggcgctg
ccggtcatgccgcgcgcggtcggcctcgtcacctcgctcggcgccgcggcgctgcacgac
gtggtcacggcgctgcggcgccgcgtgccgcacattcccgtggtgctggcgccggcggcg
gtgcagggcgccaacgcgccggcggaactcgtgcgcgcgctgcaatcgctgtacgcactg
gaaccggccgtcgacgtgatcctgctggtgcgcggcggcggctccatcgaggatctctgg
gcgttcaatgatgaagccctggcgcgcaccatcgtccaaagcccggttccgctgatctgc
ggcgtcggccacgaaaccgacttcaccatcgccgacttctgcgccgacctgcgcgcgccc
acgcccacggccgcggcggagctcgtcagcgcgccccaggcgatgtggctcggtgcgatc
gatctgctggatgaacggctcgacagcgcactgggtgcgcgcctcgatgtactggggcag
cgcctcgaccaggcggcagcgcgcctgggccggccctccgggctggtggcgcgccagcag
ctgcggctcgcgcatcattcgcagcggctgcgctatgcgctgctgtccagggccgagcgc
ctggcccaggtgccgcgcgcgattgctgccgattttccgctcaggctcgagcgcgcgatg
gcgcagcggcgcgagcggctggaacgcgtcgccctgcgcctgcggctgctcgatcctgcg
ctggtgctccagcgcggctatgcctggctcaccgatcccgacggccgcgcgatcgtcagc
gccaagaagctgagcccgggcgatgccgtggtcgcgcggctcgccgatggttcggtcgac
ctggccgtcgtgcccggcaaaacgggaacgcgtccgacgccgggcgcgtaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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