KEGG   Variovorax paradoxus S110: Vapar_3107
Entry
Vapar_3107        CDS       T00916                                 
Name
(GenBank) N-terminal methylation site
  KO
K08084  type IV fimbrial biogenesis protein FimT
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_3107
Secretion system [BR:vap02044]
 Type II secretion system
  Pilin secretion/fimbrial assembly protein
   Vapar_3107
SSDB
Motif
Pfam: GspH Flavi_NS2B
Other DBs
NCBI-ProteinID: ACS19726
UniProt: C5CPY7
Position
1:complement(3267872..3268303)
AA seq 143 aa
MMVVIVLVAILLALALPSFNSLIEKYRVEGMASALVASVSHARAEAARRGQAVTIRQRAE
CSGADWSCGWETVVGSGTGFEILQRQDPDTRVAIQKSALGPMAFDPMGHFSSVARISFHP
VGSASSSNDVAVCLSLGWRVRRC
NT seq 432 nt   +upstreamnt  +downstreamnt
atgatggtcgtcatcgtactggtggccatcctgctggcactggcgctgcccagcttcaac
agcctgatcgagaagtaccgcgtcgagggcatggcgtcggctctggtggcgagcgtgagc
catgcgcgtgcagaggcggctcggcgcgggcaggccgtgaccatccggcagcgtgcggag
tgcagcggcgcagactggagctgcggctgggaaaccgtggtcggcagcggcaccgggttc
gaaatcctccagcggcaagaccctgacacgcgcgttgcaatccagaaaagcgcgctcgga
cccatggccttcgatcccatgggccatttttcgagcgtcgcccgcatcagcttccacccg
gttggaagcgccagttcatccaacgacgtcgctgtgtgcctgtcgctcggctggcgcgtc
aggcgatgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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