KEGG   Variovorax paradoxus S110: Vapar_3404
Entry
Vapar_3404        CDS       T00916                                 
Name
(GenBank) DNA internalization-related competence protein ComEC/Rec2
  KO
K02238  competence protein ComEC
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_3404
Secretion system [BR:vap02044]
 Type II secretion system
  Competence-related DNA transformation transporter (DNA-T) core components
   Vapar_3404
SSDB
Motif
Pfam: Competence DUF4131 Lactamase_B Lactamase_B_2 DUF6133
Other DBs
NCBI-ProteinID: ACS20021
UniProt: C5CSR4
Position
1:complement(3586203..3588446)
AA seq 747 aa
MALALACGALAAGGLAGWRAAVYAAGALDPALEGRDLQVVGVVAQMPQRNEGGTRFRLDV
ESARWADGRAGAAPRVPARIALGWYREDSSLWGRATEGRATAGDAAALHAGERWRLTVRL
KAPHGNLNPHGFDSELWLWEQGVHASGYVRTGARDAAPAHLQSTWLHPIERAREAVRDAV
FERVADARQAGVIAALVTGDQGAIDRSDWDVFRATGVAHLMSISGLHITMFAWLAAHGVG
ALWRRSGRLMLRVPAPQAALAGGVLLAGLYALFSGWGVPSQRTVWMLATAALLRLTGRRW
PWPHVWLLIAAVVVAVDPWALMQAGFWLSFVAVGILFATGFMRPAEEAAGRSARLLAFFR
EQWVITLALTPLSLLLFQQVSVVGLLANAVAIPWVTLVVTPLAMLGAVAPPLWDLAAWAV
QALALLLRWLAALPYATLSMAAPPVWMAACGVAGGVLLAMRLPWSLRTLGLPLLLPVLLW
HAPRPAAGQFELLAADIGQGNAILVRTATHSLLYDAGPRYSLESDAGHRVLVPLLRAFDE
RLDMLVLSHRDSDHTGGAPAVLAMQPQAALSSSIEAAHPLQSVRPARRCEAGQRWSWDGV
DFEILHPATGDYLSFTKPNAVSCVLRIANGGATVLLAGDIERLQEAALVSRAADLRADVL
LAPHHGSKSSSSAVFLEAVRPRIALVQAGYRNRFGHPAPEVVERYAAQGVKLVESVPCGA
VLWRSREPGEVGCERERNARYWHHRLP
NT seq 2244 nt   +upstreamnt  +downstreamnt
atggcccttgcgctggcctgcggtgcgcttgccgccggcgggctcgcgggctggcgcgcg
gcggtctacgcagcgggcgcactcgacccggccctcgaaggccgcgacctgcaggtggtg
ggcgtggtcgcgcagatgccccagcgcaacgaaggcggcacgcgctttcggctcgatgtg
gaatcggcgcgctgggcggatgggcgcgccggggccgcgccgcgcgttccggcgcgcatc
gcgctcggctggtaccgcgaggacagctctctctgggggcgcgcgacggaaggccgagcc
acggccggcgacgcggccgcgctgcatgcgggcgagcgctggcgcctcacggtgcggctc
aaggcgccgcacggcaatctcaatccgcacggcttcgacagcgaactgtggctctgggag
cagggcgtgcatgccagcggctatgtgcgaaccggcgcccgcgatgccgcaccggcacac
ctgcaatccacatggctgcatccgatcgagcgtgcgcgggaggcggtgcgcgacgcggtg
ttcgagcgcgtggccgacgcgcggcaggccggcgtcatcgccgcactcgtgaccggcgac
cagggcgccatcgaccgcagcgactgggatgtgttccgcgccaccggcgtggcccacctg
atgtcgatctcggggctgcacatcaccatgttcgcctggcttgccgcgcatggggtgggc
gcgctctggcggcgcagcggccggctgatgctgcgcgttcccgcgccgcaggccgcgctg
gccggcggcgtgctgctggccgggctctatgcgcttttcagcggctggggcgtgccttcg
cagcgcacggtctggatgctcgcgaccgcggcgctgctgcggctcacggggcggcgctgg
ccatggccccatgtctggctgctgatcgcggcggtggtggtggccgtcgacccgtgggcg
ctgatgcaggccggcttctggctcagcttcgtggcggtcggcatcctgttcgcgaccggc
ttcatgcggccggccgaggaggcggcgggccggtcggcccggctgctggcgttcttccgc
gagcagtgggtgatcacgctggcgctgacgccattgagcctgctgcttttccagcaggtg
tcggtggtggggctgctggccaatgcggtggcgatcccctgggtcacgctggtggtcacg
ccgctggcgatgctgggggcggtggcgccgccgctctgggatcttgccgcctgggccgtg
caggcgctggccctgctgctgcgctggctggccgcactgccgtacgccacgctctcgatg
gcggcgccgcccgtgtggatggcggcctgcggcgtggcgggcggcgtcctgcttgcgatg
cggctgccgtggtcgctgcgcacgctgggcctgccgctcctcttgccggtgctgctctgg
cacgcgccccggccggccgcggggcagttcgagctgctggctgcggacatcgggcagggc
aacgcgatcctcgtgcgcaccgcgacgcacagcctgctgtacgacgcgggcccgcgctac
agcctcgagagcgacgccggccatcgcgtgctcgtgccgctgctgcgcgccttcgacgag
cggctggacatgctggtgctgagccaccgcgacagcgaccacaccggcggcgcgcccgcg
gtgctcgcgatgcagccgcaggcggcgctgtcgagctcgatcgaggccgcgcacccgctg
cagtcggtgcgcccggcaaggcgctgcgaggcggggcagcgctggagctgggacggcgtg
gatttcgagatcctccatccggcgacgggcgactacctgtcgttcaccaagcccaatgcc
gtttcttgcgtgctgcgcatcgccaacggcggcgccacggtgctgctggccggagacatc
gagcgcctgcaggaggcggcgctggtgtcgcgcgcggccgacctgcgcgccgacgtgctg
ctcgcgccgcaccacggcagcaagagctcgtcgagtgccgtgttcctcgaagcggtgcgc
ccgcgcatcgcgctggtccaggcgggctaccgcaaccgtttcggccatccggccccggaa
gtggtcgagcgctatgccgcgcagggcgtgaagctggtcgagagcgtgccttgcggcgcc
gtgctgtggcgcagccgggaaccgggcgaagtcggctgcgaacgggagcgcaacgcccgg
tattggcaccaccgcctgccgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (19)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (31)   

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