KEGG   Variovorax paradoxus S110: Vapar_4277
Entry
Vapar_4277        CDS       T00916                                 
Name
(GenBank) dihydropyrimidinase
  KO
K01464  dihydropyrimidinase [EC:3.5.2.2]
Organism
vap  Variovorax paradoxus S110
Pathway
vap00240  Pyrimidine metabolism
vap00410  beta-Alanine metabolism
vap00770  Pantothenate and CoA biosynthesis
vap01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vap00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00240 Pyrimidine metabolism
    Vapar_4277
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    Vapar_4277
  09108 Metabolism of cofactors and vitamins
   00770 Pantothenate and CoA biosynthesis
    Vapar_4277
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:vap04147]
    Vapar_4277
Enzymes [BR:vap01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.2  In cyclic amides
    3.5.2.2  dihydropyrimidinase
     Vapar_4277
Exosome [BR:vap04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Vapar_4277
SSDB
Motif
Pfam: Amidohydro_1 Amidohydro_3 Urease_alpha
Other DBs
NCBI-ProteinID: ACS20890
UniProt: C5CYS9
Position
1:complement(4518457..4519884)
AA seq 475 aa
MTFRDLDLVVRNARVATASDTFDSDIGIRDGRIVQLGLALPPGRREIDAAGGYVTPGGVD
AHCHLDQPMEPPVRMADDFDTGTRAAACGGTTTVIPFAAQHKGQSLRAAVQDYHQRAEGR
AHVDHAFHLIVSDPTEEVLKHELPQLIAEGYTSFKIYMTYDDLKLDDGQILDVLAVAREH
GAMAMIHAENADCIEWLTKRLEASGRTAPRFHAHARPMLVEREATHRAIALSELVDVPIM
IVHVSGREAVEQIRWARAHGLSVFAETCPQYLFLTAEDLGIDDSYQGARCVCSPPPRNRE
NQQVIWNGLADGLFTIFSSDHAPFRYDAPEGKKPGGEEVAFRHIPNGIPGIETRLPLLFS
HGVLDGRITINRFVELTSTNPAKAYGLHPRKGTIAVGADADLVVWGSTPRAIRNADLHHA
VDYTPYEGIDVKAWPALTLARGEVVWDGERFHPRAGRGEFLRRAGPTLLPTRRPA
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgaccttccgcgacctcgacctcgtggtgcgcaacgcccgcgttgccaccgccagcgac
accttcgactcggacatcggcatccgcgacggccgcatcgtgcagctgggcctcgcgctg
ccccccgggcggcgcgagatcgatgccgccggcggctacgtgacgccgggcggcgtcgat
gcccactgccacctcgaccagccgatggagccgccggtgcgcatggccgacgacttcgac
accggcacccgcgccgcggcctgcggcggcaccaccacggtgatcccgttcgcggcgcag
cacaagggccagtcgctgcgcgccgccgtgcaggactaccaccagcgcgccgaaggccgt
gcccacgtcgaccatgccttccacctgatcgtgagcgacccgaccgaggaggtgctcaag
cacgagctgccgcagctgatcgccgagggctacacctcgttcaagatctacatgacctac
gacgacctgaagctggacgacggccagatcctcgacgtgctggcggtggccagggagcac
ggcgcgatggccatgatccatgccgagaacgccgactgcatcgagtggctgaccaagcgg
ctcgaagccagcggccgcaccgcgccgcgcttccatgcgcatgcgcggccgatgctggtg
gagcgcgaggcgacccaccgcgcgatcgcgctgtcggaactggtcgacgtgccgatcatg
atcgtgcacgtgtcgggccgcgaagccgtcgagcagatccgctgggcgcgcgcgcacggc
ctgagcgtgtttgccgagacctgcccgcagtacctgttcctgacggccgaggacctgggc
atcgacgacagctaccagggtgcacgctgcgtctgcagcccgccgccgcgcaaccgcgag
aaccagcaggtgatctggaacggcctcgccgacgggctgttcaccatcttctcgtcggac
cacgcgccgtttcgctacgacgcacccgagggcaagaagcccggcggcgaagaggtggcc
ttccgccacattcccaacggcatcccgggcatcgagacgcggctgccgctcttgttctcg
cacggcgtgctcgacgggcgcatcacgatcaaccgcttcgtcgagctcacctccaccaat
cccgccaaggcctacggcctgcatccgcgcaagggcacgatcgccgtcggcgccgacgcc
gacctcgtggtctggggcagcacgccgcgcgccatccgcaacgctgacctgcatcatgcg
gtcgactacacgccctacgaaggcatcgacgtcaaggcatggcccgcgctgactttggcg
cgcggcgaagtcgtgtgggacggcgagcgcttccatccgcgcgccgggcgcggcgaattc
ctgcggcgggccgggcccaccttgctgcccacccgtcgacccgcctaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (36)   

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