KEGG   Variovorax paradoxus S110: Vapar_5816
Entry
Vapar_5816        CDS       T00916                                 
Name
(GenBank) type IV secretion/conjugal transfer ATPase, VirB4 family
  KO
K03199  type IV secretion system protein VirB4 [EC:7.4.2.8]
Organism
vap  Variovorax paradoxus S110
Pathway
vap03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Vapar_5816
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_5816
Enzymes [BR:vap01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Vapar_5816
Secretion system [BR:vap02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Vapar_5816
SSDB
Motif
Pfam: CagE_TrbE_VirB P-loop_TraG
Other DBs
NCBI-ProteinID: ACS22405
UniProt: C5D061
Position
2:520074..522581
AA seq 835 aa
MKLLSRPEHALRREAGAATMIPLSAHVDEHVALTRAGDYVQTLRLAGTSFESADDEDINS
WHERLNVLLRNIASPNLALWTHVIRRREMAYPAGRTTPGFADEIEQRYRRKMAGERLMVN
ELYLSVVFRPQPTRIGNAALRLFKRADPEGARAELRDALDACSKLRQELLAALERYDPEA
LGIYRLQGNDGLFSSLVEFHGLLVNGEWQRMPLPRAPLNEVLATTRPFFGNEAMEYRAGT
QTRIGAFLGIKEYPTPTAPGMFSALLTAPFPFVLTQSFTFLAKSTATDMMSRQHHRMAAA
GDLAVSQAEELKDALDDLMSNRFVVGDHHFSLHVLADTYDGLSEAEGRPRLKQLNDNVAR
ARYLLGDAGMVVAREDLALEAAFWAQLPGNFGYRSRKAPVTSRNFAAMSPFHNFPTGRAT
GNYWGDALTMFTTRAGSPYYFSLHASDPRSRDGGSRRDVGHITGVGPVGTGKTTLLGFCM
VAICNRLDATQVVFDKDEGLHILVRALGGQYLPLKNGAPTGCNPLQLDDSIADNVEFMRH
WLRRLVMRTPGETLTVRQEDDLDQALRGTLKLERSFRRLSRLAAFLDITDPEGMHARLRR
WCASEHGDYAWVFDNEHDHVAPLLARHALVGFDVTDFLDNEVVRAPLTLYLFHLVNRMVD
GRPLVCWMDEFAKLLSDPAFAKFAKNGLETWRKKNANIATFTQSTSHVLDSGIARAIVEQ
TPTKILFPNPEADYDEYTRGFNLTDREFALIKQEIEPGSRQFLIKQNHVSVVAQLDLHGF
DDALHVISGRTGNVRLMRELIAICGPDPAQWLPSFRRALANNPSRSPSHQEISHA
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgaagctgctctcacgccccgagcacgcgctgcgccgcgaagccggcgccgcgaccatg
attccgctttcggcgcatgtggacgagcatgtggccctgacacgtgccggagactatgtg
cagacactccgcctggccggcacgagcttcgaaagcgcggacgacgaggacatcaacagc
tggcatgagcgcctcaatgtcctgctgcgcaacatcgcgtcgcccaacctggcgctctgg
acccacgtgatccgccgccgcgagatggcctatccggccgggcggacgacgcccggcttc
gccgacgagatcgagcagcgctatcgccgcaagatggctggcgaacggctgatggtcaat
gaactgtacctgtcggtcgtcttccggccgcagcccacccgcatcggcaacgccgcattg
cggctgttcaagcgcgcggacccggagggtgcgcgggcggagctgcgcgatgcgctggac
gcctgcagcaagctgcgccaggaactgctcgccgccctggaacgctacgaccccgaagca
ctgggcatctatcggctgcaggggaacgacgggcttttttcctccctcgtggaattccac
ggcctgctcgtcaacggggagtggcagcgcatgccgctgccgcgcgcccccctcaacgag
gtcctggccaccacccggcccttcttcggcaacgaggccatggaataccgggccggcacc
cagacccgcattggcgccttcctcggcatcaaggaataccccacgcccaccgcgccgggc
atgttcagcgccctgctgaccgcacctttccccttcgtgctcacgcaaagcttcaccttc
ctggccaagagcacggccaccgacatgatgagccgccagcatcaccggatggccgccgcc
ggtgacctcgcagtctcgcaggccgaggaactcaaggacgcactggacgacctgatgagc
aatcgcttcgtggtgggcgaccaccatttcagcctgcatgtgctggccgacacctacgac
ggcctcagcgaggccgagggccggccccgtctgaagcaactcaacgacaacgtcgcccgc
gcccgctacctgctgggcgacgcgggaatggtggtggcccgcgaggacctcgcgctggag
gcggccttctgggcgcagctgccgggaaacttcggctaccgcagccgcaaggcgcccgtc
accagccgcaacttcgccgccatgtcgcccttccacaatttcccgaccggccgggcaacg
ggcaactactggggcgatgcgctgaccatgttcaccacgcgcgcgggctcgccctactac
ttctcgctgcatgcgagcgacccgcgcagccgggacggcggcagccgccgcgatgtcgga
cacatcacgggcgtgggaccggtcgggaccggcaagaccacgctgctgggcttctgcatg
gtggcgatctgcaatcgcctcgacgccacacaagtggtcttcgacaaggatgaagggctg
catatcctggtgcgggccctgggcggccagtacctcccactcaagaacggggcacccacc
ggctgcaatccgttgcagctcgacgattcgatcgccgacaacgtcgagttcatgcggcac
tggctcaggcgcctcgtgatgcgcacgccgggcgagaccctgaccgtccggcaggaagac
gatctcgaccaggcactgcgcggcaccctgaagctcgagcgctctttcaggcgcctgtcc
cggctcgccgccttcctcgacatcacggatccggaggggatgcacgcgcgccttcggcgg
tggtgcgcctcggagcacggcgactatgcctgggtcttcgacaacgagcacgaccacgtg
gccccgctgcttgcccggcacgccctcgtgggcttcgatgtgaccgacttcctggacaac
gaggtcgtgcgcgccccgctgaccctgtacctctttcatctcgtgaaccggatggtggac
ggccgcccgctggtgtgctggatggacgagttcgccaagctgttgagcgatccggccttc
gcgaagttcgccaagaacggcctggagacctggcgcaagaagaacgcgaatatcgccacg
ttcacccaaagcaccagccacgtgctcgattccggcattgcccgcgcgatcgtcgagcag
acgccgacgaagatcctgttccccaatccggaggcggactacgacgaatacacccggggc
ttcaacctgaccgaccgggagttcgcgctgatcaagcaggagatcgagcctggctctcgc
cagttccttatcaagcagaaccatgtcagcgtggtcgcgcagctcgatctccatggattc
gacgacgccttgcacgtcatctccgggcgcaccggcaacgtccgcctcatgcgtgaactc
atcgcgatctgcggaccggatcccgcccaatggctgccgtctttccgcagggcgcttgcg
aacaacccttcccgttcaccctcacaccaggagatctcccatgcgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (22)   

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