KEGG   Variovorax paradoxus S110: Vapar_5817
Entry
Vapar_5817        CDS       T00916                                 
Name
(GenBank) type IV secretion system family protein
  KO
K03200  type IV secretion system protein VirB5
Organism
vap  Variovorax paradoxus S110
Pathway
vap03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Vapar_5817
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_5817
Secretion system [BR:vap02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Vapar_5817
SSDB
Motif
Pfam: T4SS CENP-Q
Other DBs
NCBI-ProteinID: ACS22406
UniProt: C5D062
Position
2:522574..523308
AA seq 244 aa
MRRFLVALFLAATASLAPPHAKAGIPVIDITAVANLIQQVMYWQQQISGMQKQYDQLKES
KDQLTRTHNAMTGSRGMEQLLPTPDLARNYLPPSYGELMGTLNGSSASYAGLASQVQSIM
KANSVLSGTQLEGLSPELRQVVEQGRQSAALLNGMTQNAYQNTSQRFSALQLLIDRIASA
QDPKAIQDLQARIQAEQNMLTNEQTKLQSLYQVAHSEELMRKQRAREQAASGIGSMRSLP
AVDY
NT seq 735 nt   +upstreamnt  +downstreamnt
atgcgtagattccttgttgccctcttcctcgcggccacagcctcgctcgcaccgccgcac
gcgaaagccgggatcccggtgatcgacatcacggccgtcgccaacctgatacagcaggtc
atgtactggcagcagcaaatctccgggatgcagaagcagtacgaccagctgaaggaatcg
aaggaccagctgacccggacccacaacgccatgacgggaagccgaggcatggagcagctg
ctgccgaccccggacctcgcacgcaactacctgcctcccagctatggcgaactgatgggc
acgctcaacggctcgtcggccagttatgccgggctggccagccaagtccagtcgatcatg
aaagccaacagcgtcctctcgggaacccagttggaggggctgagtccggagttgcgccag
gtcgtcgagcaaggacggcaatcggcagcgctgctcaacggaatgacccagaacgcgtac
cagaacaccagccagcgcttctcggccctgcaactgctgatcgaccgcatcgcttccgca
caggatcccaaggcgatccaggacctgcaggcaagaatccaggccgagcagaacatgctc
accaatgagcaaacgaagctgcagagcctttatcaagtcgctcattctgaggagctcatg
cgcaaacagcgcgcgcgagaacaagctgcctcgggcataggttctatgcgatcgctcccc
gctgtcgactactag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (4)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (14)   

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