KEGG   Variovorax paradoxus S110: Vapar_5822
Entry
Vapar_5822        CDS       T00916                                 
Name
(GenBank) P-type DNA transfer ATPase VirB11
  KO
K03196  type IV secretion system protein VirB11 [EC:7.4.2.8]
Organism
vap  Variovorax paradoxus S110
Pathway
vap03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:vap00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Vapar_5822
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_5822
Enzymes [BR:vap01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     Vapar_5822
Secretion system [BR:vap02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   Vapar_5822
SSDB
Motif
Pfam: T2SSE nSTAND3 ResIII FtsK_SpoIIIE AAA_22 AAA_7 AAA_18 ABC_tran Mg_chelatase AAA_29 Zeta_toxin DUF815 TrwB_AAD_bind AAA_16 DEAD AAA TsaE AAA_23
Other DBs
NCBI-ProteinID: ACS22411
UniProt: C5D067
Position
2:527650..528798
AA seq 382 aa
MRFEPNRPSLDGEPGATTGDRQPARARAHDGASAEPPSSLALFLGPLGHLLGDPAVTEIC
INEPGAAFVERQSGWTCETLPFASFDWCMSIAKLVANFTRQRISANEPLLSATLPGGERI
QIVLPPATLDQTVSITIRRPSNTLWTLEELEKLHIFETTRSAPPTPACQSERASLSPEDR
ELTDLLARRQFVPFLRCAVQFRKNILLSGATGSGKTTVGKALILEVPSEDRLITIEDVKE
LSLRNQPNHVRLFYSQGAQGQAEVTPGQLLAGAKRQRPDRVFVSELRTGEEVYDYLVSVN
TGHPGSITSVHADSAEMAFVALAQLMKRSQAGHGMTTRDGVELAQMSVDIVVQCARERRD
GLLRRSVREIWYDPGTKIRRLA
NT seq 1149 nt   +upstreamnt  +downstreamnt
atgcgcttcgaaccgaaccggccatcccttgatggcgagcccggcgccaccacaggcgac
cggcagccggcgcgggcgcgcgcgcatgacggagcctccgcagagccgccgtcgtcgctt
gccctctttctcggtccgctcggccacttattgggtgatcccgcggtgaccgagatctgc
atcaacgagcccggtgcagccttcgtggaacggcagtccggctggacgtgcgagacgttg
ccgttcgcgagcttcgactggtgcatgtcgatcgcgaagctcgtggccaatttcacgcga
cagcgcatctcggccaacgagccactcctgtccgccaccctcccgggcggcgaaagaatc
cagatcgtgctgccacccgcgaccctggaccagaccgtctcgatcacgatccggcgcccc
tcgaacacgctctggaccctcgaagagctggagaaattgcacatcttcgagaccacgcgc
agtgctcccccgactccggcgtgccaatctgaacgggcgtccctgtcacccgaagacagg
gagctgacagatctcctcgcacgccggcaattcgtgcccttcctgcgatgcgccgtccag
tttcgcaagaacatcctactgtccggcgccaccggctccggcaagaccacagtcggcaag
gcgctgatcctcgaggtgccgtccgaggaccgcctgatcaccatcgaggacgtgaaggag
ctgtcgctgcgcaaccagcccaaccacgtgagactcttctattcgcaaggcgcccagggg
caggccgaggtcacgcccggccaactgctcgccggcgccaagcggcaacgtcccgaccgg
gtgttcgtgtccgagcttcgcaccggcgaagaggtctacgactatctggtgtccgtgaac
accggccacccaggctcgatcaccagcgtgcacgccgacagcgcggagatggccttcgtg
gcgctggcgcagctgatgaagcgcagtcaggcgggccacggcatgaccacacgcgacggc
gtggaactggcgcagatgagcgtggacatcgtcgtgcagtgtgcgcgagagcgccgggac
ggcctgctgcggcgtagcgtgcgggagatctggtatgaccctggcaccaagatacgaagg
cttgcctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (18)   
   Pfam (18)   
All databases (34)   

Download RDF
DBGET integrated database retrieval system