KEGG   Vigna angularis (adzuki bean): 108321630Help
Entry
108321630         CDS       T04660                                 

Definition
(RefSeq) probable mediator of RNA polymerase II transcription subunit 37c
  KO
K03283  heat shock 70kDa protein 1/2/6/8
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03040  Spliceosome
var04141  Protein processing in endoplasmic reticulum
var04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108321630
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    108321630
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    108321630
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:var01009]
    108321630
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:var03041]
    108321630
   03009 Ribosome biogenesis [BR:var03009]
    108321630
   03110 Chaperones and folding catalysts [BR:var03110]
    108321630
   04131 Membrane trafficking [BR:var04131]
    108321630
   03051 Proteasome [BR:var03051]
    108321630
   03029 Mitochondrial biogenesis [BR:var03029]
    108321630
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:var04147]
    108321630
Protein phosphatases and associated proteins [BR:var01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-5
    PP5-interacting proteins
     108321630
Spliceosome [BR:var03041]
 Complex B
  Other components
   Prp19 complex
    108321630
 Complex C
   Prp19-CDC5 complex
    108321630
Ribosome biogenesis [BR:var03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    108321630
Chaperones and folding catalysts [BR:var03110]
 Heat shock proteins
  HSP70 / DNAK
   108321630
Membrane trafficking [BR:var04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Other core components
    108321630
 Autophagy
  Chaperone mediated autophagy (CMA)
   Chaperones
    108321630
Proteasome [BR:var03051]
 Eukaryotic proteasome
  Assembling factors
   Other assembling factors
    108321630
Mitochondrial biogenesis [BR:var03029]
 Mitochondrial protein import machinery
  Endoplasmic reticulum membrane and cytosol
   Other ER-memrane and cytosol factors
    108321630
Exosome [BR:var04147]
 Exosomal proteins
  Proteins found in most exosomes
   108321630
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: HSP70 MreB_Mbl FGGY_C DDR Herpes_BLRF2 Med15_fungi
Motif
Other DBs
NCBI-GeneID: 108321630
NCBI-ProteinID: XP_017408932
Position
Un
AA seq 647 aa AA seqDB search
MAEDKKGLAIGIDLGTTYSCVAVWQQQHNRVQIIHNDQGNNTTPSCVAFTDHERLIGDAA
KNHAVFNPENTIFDAKRLIGRKYSDPLVQKDKMLWPFKVVAGVNDKPMIYLKYKGQEKSL
CAEEISSMVLSKMRDIAEAYLEKPVKNAVVTVPAYFNDSQRKATMDAGAIIGLNVIRIIN
EPTAAAIAYGLDKRNDCVGQRNIFVFDFGGGTFDVSILTIENEVFQVKATAGNSHLGGED
IDNRMMNYFVEEMKRKSKVDISGNPRALRRLKSACERAKRTLSSAITTSIEIDGLFEGID
LLSSITQAKFEEINMEVFEECMETVDRCLRDAKMEKSSVDDVVLVGGSSRIPKMQQLLED
FFNGKDLCKSVNPDEAVAYGAAVQAALLSEGIKNVPDLVGKRKDVTPLSLGISIKGDLMT
FVIPRNTTIPIKKTQVFLTSEDNQFSAKIVVYEGERVKASDNNLLGSFIISGFPPAARGY
PFDVTFAINENGILSVSAEEKVTGNRSEIIISNDKGRLSNAEISKMIKEAENYESEDEKF
LTKAKAMKDLDDHVYKIRKALKKEDISSMLSSKEKKDIRSKISRATDMLDRRNEMEDIVA
IDDFLKDLKAISERIMVAEKVAKIKLIFVDYLHRVKSLIQPIMEIKF
NT seq 1944 nt NT seq  +upstreamnt  +downstreamnt
atggccgaagacaaaaagggattggcaataggaatcgaccttggcacaacatactcctgt
gttgcagtatggcagcaacaacataatagggtgcagatcattcataatgatcaaggcaac
aataccactccttcttgtgttgctttcacggaccatgaaaggttgataggagatgctgct
aaaaatcatgctgttttcaatccagagaacaccatcttcgatgctaagaggttgatcggt
aggaaatacagtgacccacttgttcagaaagacaaaatgttgtggccatttaaggttgtt
gccggtgtcaatgacaaacccatgatttaccttaagtacaagggtcaggagaagagcctt
tgtgcggaggaaatatcatccatggtcctctcaaagatgcgggacattgcagaggcatac
ttggaaaagcctgtgaagaatgcagtggttactgtgcctgcctatttcaatgattctcag
cgcaaagctaccatggatgctggtgctattataggtctcaatgttattcgtataatcaat
gaaccgacagctgcagcaattgcatacggtcttgataaaagaaatgattgtgttggacag
cgaaatatttttgtctttgactttggaggtggtacattcgatgtgtctattctcactatt
gagaacgaagtctttcaagttaaggccactgccggaaacagtcaccttggcggagaggac
attgataatagaatgatgaactactttgtggaggagatgaaaaggaaaagtaaagttgac
ataagtgggaatccacgtgccttaaggaggttgaaaagtgcttgcgagagagcaaaaagg
acactgtcatctgctattactacaagcatcgagatagatggtttatttgaaggcattgat
ttgctttcttcaataacccaagcaaaatttgaagaaatcaatatggaggtgtttgaagag
tgtatggaaacagtagataggtgtcttagggatgctaagatggagaaaagtagtgtggat
gatgttgttcttgttggtggttcttctaggattcccaaaatgcagcagctactcgaagac
tttttcaatgggaaggatctttgcaagagcgtaaaccctgatgaggctgttgcttatggt
gcagctgtgcaggctgctctcttgtctgaaggcattaagaatgttccagatttggttggt
aaaaggaaagatgttactccgctttcacttggcatatcgataaagggggatctcatgact
tttgtgattcctaggaacactactattcctataaagaagacacaagtttttctgacatcc
gaagataaccaattctcagccaagattgtggtttatgagggcgagagagtaaaagctagt
gataataatttgttgggttcttttattatttctggctttcccccagctgctcgtggttac
ccttttgatgtgacttttgcaataaatgaaaatggcattctttccgtttctgctgaggaa
aaagtaaccggtaataggagtgaaattataatatccaatgacaaaggaagactatcaaat
gcagaaattagtaaaatgattaaagaagcagagaattatgagtctgaagatgagaagttt
cttacgaaggccaaagcaatgaaggatttagatgatcacgtttataagatcagaaaggct
ttaaagaaagaggatatcagctcaatgttgagctcgaaagaaaagaaagatatcaggtct
aaaatttctagagcaactgatatgcttgataggcggaacgagatggaagatatagttgct
attgatgactttctgaaagatcttaaagcaatcagtgaacgaattatggtcgcggaaaag
gttgctaaaatcaaactaatttttgtggattatctgcacagggtgaagagcctcattcaa
cccattatggagattaagttttaa

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