KEGG   Vigna angularis (adzuki bean): 108332138
Entry
108332138         CDS       T04660                                 
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
  KO
K07466  replication factor A1
Organism
var  Vigna angularis (adzuki bean)
Pathway
var03030  DNA replication
var03420  Nucleotide excision repair
var03430  Mismatch repair
var03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:var00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108332138
   03420 Nucleotide excision repair
    108332138
   03430 Mismatch repair
    108332138
   03440 Homologous recombination
    108332138
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:var03000]
    108332138
   03032 DNA replication proteins [BR:var03032]
    108332138
   03400 DNA repair and recombination proteins [BR:var03400]
    108332138
Transcription factors [BR:var03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    108332138
DNA replication proteins [BR:var03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    108332138
DNA repair and recombination proteins [BR:var03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     108332138
   MMR (mismatch excision repair)
     108332138
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     108332138
SSDB
Motif
Pfam: Rep_fac-A_C REPA_OB_2 Rep-A_N tRNA_anti-codon RMI1_C zf-like
Other DBs
NCBI-GeneID: 108332138
NCBI-ProteinID: XP_017422774
UniProt: A0A0L9UBM5
Position
4:complement(1463567..1469640)
AA seq 634 aa
MSVNLTENAIPAIINGDVDAKPLVQVLDVTLVSNSNNSQQQKYRLLISDAVSSHHAMLAT
QLNDRIRTGRVRKGSVVQLLDYICTPFKNRKIIMVLNMETIIADFEIIGNPKPPLDSDLP
GVRAIADNTVESLARSNNTSNTISNSAAQNASHDKAQNFRPTIQPPYQPPPVYKGRGAVM
KNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSDGGEIRV
TCFNAVVDRFYSVIEVGKVYMISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDDS
IPRQQFSFRPISDIENVDNNSILDVIGVVTSVNPSVPILRKNGMETQRRVLSLKDTSGKS
VELTLWGEFCNREGQQLQEMVDSGFFPILAVKAGKVNDFSGKSIGSISTTQLFINPEFPE
ANSLRQWFDLVGKDSASLSISRDVIPGGTKNEVRKTVSQIKDEGLGRSDKPDWITIRATI
AFIKTDTFCYTACPLMIGDRQCNKKVTRSGNTRWQCDRCNQEFEECDYRYLLQAQILDGT
GLTWVTAFQEAGEEIMEYSAKDLYLLKHEQQDDERFAEVLKSRLFKQFMFRLKIKEELYG
DEQKVKITVVKVDKVNYSSESQYMLDSISKFCRK
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgtcagtgaatctcaccgaaaacgcgattccggcgataattaatggcgacgtcgacgcc
aaaccgcttgttcaggttttggacgttaccttagtctccaacagcaacaactcgcagcag
cagaaataccgtctcctgatttccgacgccgtttcgtctcaccacgcgatgctcgccact
cagctcaacgaccgaatccgaaccggtcgagttcggaagggttcggttgttcagcttctc
gattatatatgcactcctttcaagaaccgcaagattattatggttctaaacatggaaact
ataatagctgattttgagatcattgggaatccgaagccacccttggattcagatttacca
ggtgtgagggctatagcagataacactgtggagagtttggccaggagtaataatactagt
aatactattagtaactctgctgctcaaaatgcaagtcatgataaagcccagaatttcagg
ccaacaattcaacctccataccaaccgcctcctgtttacaaaggccgtggtgcagttatg
aaaaatgaggcgccagcacgcatcattcctatagctgctttaaatccttatcaaggtcgg
tgggctatcaaggcaagggtaactgctaaaggtgatctgcgccgctacaataatgcacgt
ggtgatgggaaagtcttctcatttgatctcctggattctgatggaggtgaaatacgagta
acatgctttaatgctgttgttgatcgattctatagtgtaattgaggttggtaaagtttac
atgatatcgaaaggtagcttaaaacctgcacagaagaatttcaaccatttgaagaatgaa
tgggaaatttttttggaatcaacttcaacagtagagttgtgcccggatgaagatgattct
atacctagacagcagttctcattccgacctatcagtgacattgagaatgttgacaataac
tccatccttgatgttattggggttgtgacatctgtgaacccttctgttcccatcttgagg
aagaatggaatggaaacccagagaagagttttgagtctaaaagacacttctggcaagagt
gttgaacttaccctgtggggagaattttgcaatagggaagggcaacagttgcaagagatg
gtagattctgggtttttccctattttagctgtcaaagcagggaaggtgaatgattttagt
ggaaagtcgataggctctatttctaccacacagcttttcataaatcctgagttccctgag
gccaatagcttaagacaatggtttgatctagttggaaaagattctgcttccctttcaatt
tctagggacgttattcctggaggaacgaagaatgaggttcgtaaaactgtatctcaaatc
aaggatgaaggtttgggacgatcagacaagccagactggataacaataagggcaaccata
gcattcatcaagactgatacattttgttacacagcttgccctctgatgattggagatcga
caatgcaataaaaaggtgactaggtcaggaaacacaagatggcaatgtgatagatgcaat
caagaatttgaggagtgtgattaccgataccttctccaagctcaaattctggatggcaca
ggattaacttgggtaactgcttttcaggaagcaggtgaagagattatggagtattcagcg
aaagatctgtacttgttgaagcatgaacaacaggatgatgagaggtttgcagaagtactc
aagagccgactcttcaaacagtttatgtttaggctgaaaatcaaagaggaattatatggc
gatgaacagaaggtcaagattactgtagttaaggtagataaggtgaattattcttcagag
agtcaatacatgcttgattcgatttccaagttttgtaggaagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   RefSeq(pep) (11)   
DNA sequence (12)   
   RefSeq(nuc) (12)   
Protein domain (6)   
   Pfam (6)   
All databases (43)   

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