KEGG   Vigna angularis (adzuki bean): 108340225
Entry
108340225         CDS       T04660                                 
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
  KO
K15865  threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]
Organism
var  Vigna angularis (adzuki bean)
Brite
KEGG Orthology (KO) [BR:var00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:var03016]
    108340225
Enzymes [BR:var01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.5  tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
     108340225
Transfer RNA biogenesis [BR:var03016]
 Eukaryotic type
  tRNA modification factors
   Methylthiotransferase
    108340225
SSDB
Motif
Pfam: Radical_SAM UPF0004 TraT TRAM
Other DBs
NCBI-GeneID: 108340225
NCBI-ProteinID: XP_017432932
Position
8:complement(30676686..30681833)
AA seq 613 aa
MEDIEDLLAGSGSATPPGFRLPLAAAVGVGVGVGSKRNKLSSSPSPAIPGTQTIYIKTFG
CSHNQSDSEYMAGQLSAFGYSLSDNPDQADLWLINTCTVKSPSQSAMDTIITKGKSSNKP
LVVAGCVPQGSRYLKELEGISIVGVQQIDRVVEIVEETLKGHEVRLLTRKTLPALDLPKV
RKNKFVEILPINVGCLGACTYCKTKHARGHLGSYTIDSLVGRVKSVISDGVKEIWLSSED
TGAYGRDIGVNLPTLLKALVEELPADASTMLRIGMTNPPYILEHLKEIAEILRHPCVYSF
LHVPVQSGSDTVLTAMNREYTVSEFRTVVDTLTELVPEMQIATDIICGFPGETDEDFVQT
VDLVKDYKFPQVHISQFYPRPGTPAARMKKVPSNVVKRRSRELTNVFESFTPYSGMEGKV
ERIWITDIASDGIHLVGHTKGYIQVLVLAPDHMLGASAMAKITSVGRWSVFGEVIETIDH
VSDSKALNKLVPDRDLHSLCVNPAKPGGFSEDPESCACGSDICCSIDKSDASRGNAVQQN
QNNRNLVGWILRKREHLHKKVESELASGSVKKHERKMKKWDFVDKVLLGGISISIFTIIA
LVAALAFRVIWSQ
NT seq 1842 nt   +upstreamnt  +downstreamnt
atggaggacattgaagatttgctggccggaagcggaagcgcaactccaccgggcttccgt
ttgccgttggcggcagctgtgggcgttggtgttggcgttgggagcaagcggaataaactc
tcttcttcgccttctcctgcaattcctggcactcagactatctacataaagacctttggc
tgctctcacaaccagagtgacagtgaatatatggctggccagctttctgcttttggttat
tctttgagtgacaatccagaccaagcagatctctggctcattaacacttgcacagtgaaa
tcccccagtcaatctgctatggataccatcataacgaaaggaaaatcttcaaataaacca
ctagttgttgctggctgtgtccctcaaggaagtcggtatttgaaagaactggaagggatc
agcatagttggagtccagcaaattgatcgtgttgttgaaattgtagaagagactttgaaa
ggtcacgaagtccgccttttgacccgtaagacattgccagcactcgaccttccaaaggta
aggaagaacaagtttgttgagattcttcctattaatgttggttgtttaggtgcctgcact
tattgcaagacaaagcatgctcggggtcacctaggaagttatacaattgatagccttgtt
gggcgtgtaaaatctgtcatttctgatggagttaaagagatatggcttagcagtgaggac
actggagcatatggtcgtgacattggtgtgaatcttccaactttgttgaaggccttagtg
gaagaactaccagctgatgcaagcacaatgctacgtattggaatgaccaatccaccttat
atccttgaacacttgaaggaaatagctgagattttgcggcatccttgtgtgtactccttt
ctacatgtaccggttcagtcgggaagtgatactgttttgaccgcaatgaatagggaatat
actgtgagtgagttcaggactgttgtagatactctaactgagcttgtgccagagatgcag
attgccactgatataatatgtggatttcctggtgaaactgatgaagattttgtgcagact
gtcgatcttgttaaagattacaagttccctcaagttcacatttcacaattttatcctcga
ccagggacacctgctgcaaggatgaaaaaggttccaagtaatgtggttaagagaagaagc
cgagaattgacaaatgtctttgaatcattcacaccatactctgggatggaaggcaaagtg
gaaagaatttggattactgatattgcatctgatggaattcacttggttggtcatacgaaa
ggatatatacaagttcttgtacttgctccagaccatatgctgggagcttcagctatggct
aagataacatctgtgggaagatggtctgtctttggggaagtaattgagacaatcgaccat
gtaagtgacagtaaagctctaaacaagttggttcctgatcgggacttgcattctctctgc
gttaacccagccaagcctggtggattctcagaagatccagaatcttgtgcatgtggaagt
gacatctgttgtagtatcgacaagagtgacgcttcaagaggcaatgcagtgcaacagaac
caaaataatagaaatttagttggatggatactaaggaagcgggagcatctgcacaaaaaa
gttgagagtgagcttgcctcgggatctgttaaaaagcatgaaagaaagatgaagaagtgg
gacttcgttgataaggttcttttgggtggaatatctatcagcatctttactattattgct
cttgtagcagctcttgcgttcagagtaatttggtcccagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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