KEGG   Verrucomicrobia bacterium IMCC26134: IMCC26134_06735
Entry
IMCC26134_06735   CDS       T03830                                 
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
vba  Verrucomicrobia bacterium IMCC26134
Brite
KEGG Orthology (KO) [BR:vba00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vba03009]
    IMCC26134_06735
Enzymes [BR:vba01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     IMCC26134_06735
Ribosome biogenesis [BR:vba03009]
 Prokaryotic type
  ribosomal protein modification factors
   IMCC26134_06735
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2 TRAM
Other DBs
NCBI-ProteinID: AKC82545
UniProt: A0A0E3UIF7
Position
1818938..1820353
AA seq 471 aa
MSVKVSLVSLGCAKNLVDSEIMVGHLHKAGMTVVPDQDKADVVIVNTCSFIDSSKEESIN
HILEAHATRGMKKRRAGQKLIVAGCMSQRFSKELPEALPEVDAFIGLDQLTTVGAIIDEL
TGTVRAKGEAPVNFVQGRSTYIPDYDTPRFRLTPKHFAYIKIAEGCNHPCTFCIIPQIRG
RHRSRTVESVVAEARQLVAEGVKEINLISQDTTYFGMDTWEQRPNPRTPVDSSRGTALTT
LLRQLNAIEGNFWIRLLYTHPAHWSDELIKTIAECPKVARYIDIPLQHISDHMLGRMQRE
TSGDYIRDLIARIRAGIPGIAVRTTFIVGFPGETEADVDELCEFIREAKFERLGVFRYSA
EDGTRAAKMDEQLTVKVKEARWHKTMALQQEIAAEVSKSYVGKTIRVLVEEPGVARGEAD
APDIDGRVYVPRSLPVGEFADVTITDFRDYDLLALPKGQKPKEFKVAKQAQ
NT seq 1416 nt   +upstreamnt  +downstreamnt
atgagcgtcaaagtcagtctcgtttccctcggttgcgccaaaaatctcgtcgatagcgag
atcatggtcggccatcttcacaaggccggcatgaccgtggttcccgatcaagataaagcc
gacgtcgtcatcgttaacacctgttcctttatcgattcctcaaaagaggagtccatcaac
catatccttgaggcccacgccacccgcggcatgaagaaacgccgcgccggccagaagctg
atcgtcgccggttgcatgtcccagcgtttctcgaaggaactccccgaagccctgcccgag
gtggatgccttcatcggtctcgaccagctcaccaccgtgggcgccatcatcgacgagctc
accggcaccgtgcgggccaagggcgaagccccggtgaattttgtccaaggtcgctccacc
tacatacccgattacgacacgccccgcttccgtcttacccccaagcatttcgcctacatc
aagatcgccgagggctgcaaccacccctgcaccttttgcatcatcccgcagatccgcgga
cgccaccgctcccgcaccgtcgagagtgtcgtcgccgaggcccgccaactggtcgccgaa
ggggtgaaagagatcaatctcatcagccaggacaccacctactttggcatggacacctgg
gagcaacgacccaacccgcgcacccccgtcgattcgtcgcgcggcaccgccctgactacc
ctcctccgtcagctcaacgccatcgaggggaatttctggatacgcctgctctacacccac
cccgcccattggtccgacgaactcatcaagaccatcgccgagtgccccaaggtcgcccgc
tacatcgacattccccttcaacacattagcgaccacatgctcggccgcatgcaacgcgag
accagcggtgactacatccgcgacctcatcgcccgcattcgcgccggcatcccgggcatc
gcggtgcgcaccaccttcatcgtcggcttccccggcgaaaccgaggcggacgtcgatgag
ttgtgtgaattcattcgcgaggcgaagttcgaacgcctcggcgtgtttcgctactccgcc
gaggacggcacccgcgccgccaagatggacgagcaacttaccgtgaaggtgaaagaagcc
cgttggcacaagaccatggcgctccagcaggagatcgctgccgaggtcagtaaatcctat
gttggtaaaaccattcgcgtgcttgtcgaagaacccggcgtcgcccgcggtgaggcggat
gcacccgatatcgacgggcgcgtttacgtgccgcgcagcctgcccgtcggagagttcgcc
gacgtcaccataaccgactttcgcgactatgatttgctcgccttgcccaagggccagaag
cccaaggaattcaaggtcgccaaacaggcccagtaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (52)   
   KEGG ORTHOLOGY (1)   
   RefGene (49)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (72)   

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