KEGG   Verrucomicrobia bacterium IMCC26134: IMCC26134_11730
Entry
IMCC26134_11730   CDS       T03830                                 
Name
(GenBank) recombinase RecR
  KO
K06187  recombination protein RecR
Organism
vba  Verrucomicrobia bacterium IMCC26134
Pathway
vba03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vba00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    IMCC26134_11730
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vba03400]
    IMCC26134_11730
DNA repair and recombination proteins [BR:vba03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     IMCC26134_11730
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      IMCC26134_11730
SSDB
Motif
Pfam: Toprim_4 RecR_HhH RecR_ZnF Toprim
Other DBs
NCBI-ProteinID: AKC83278
UniProt: A0A0E3YUY2
Position
complement(3064635..3065246)
AA seq 203 aa
MTPAFEKLQQALKQLPGVGYRSAERMALHLLVEKPAQLPALVAALESAARTVRRCSRCGN
LAEGELCNLCEDARRDGAVVCVVEHVPDLVAMERSGAYRGVYHVLHGRLSPIQGVGPADI
NFAALEARVRSGEVRELILALSNDVEGEATCHFITQHLAAETAAGGAPIKVSRIGFGLPS
GGGVLYADAVTLKSALDGRRDYV
NT seq 612 nt   +upstreamnt  +downstreamnt
atgacgccggcctttgagaaactccagcaggcgctgaagcaactgccaggggtggggtat
aggtcggcggagcgcatggcgctgcatttgctggtggaaaagccggcacagctgccggcg
ctggtcgcggcgctggagtcggcggcgcgcacggtgcgccgttgctcgcgctgcggcaat
ctggccgaaggcgagctttgcaacctctgcgaggatgcccgtcgcgatggcgcggtggtg
tgtgtggtggagcacgtgcctgatctggtggcgatggagcgctcgggcgcgtatcgcggg
gtataccacgttttgcacgggaggctttcgccgatccagggcgtgggcccggcggacatt
aatttcgcggcgctggaggcgcgggtgcgctcgggcgaggtgagggagttgatcctggcc
ttgtcgaacgacgtggagggtgaggcgacgtgccactttatcacgcagcatctggcggcg
gagacggcggcgggcggcgcgccgatcaaggtgtcgcgcatcggcttcgggctgccgagt
ggcggcggggtgctgtatgcggacgcggtgacgctcaagagcgcgctggacgggcggcgg
gactacgtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (20)   

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