KEGG   Victivallales bacterium CCUG 44730: C5Q97_06720
Entry
C5Q97_06720       CDS       T05502                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
vbc  Victivallales bacterium CCUG 44730
Pathway
vbc03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:vbc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    C5Q97_06720
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vbc03400]
    C5Q97_06720
Enzymes [BR:vbc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     C5Q97_06720
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     C5Q97_06720
DNA repair and recombination proteins [BR:vbc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     C5Q97_06720
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS zf_Rg zf-TFIIB zinc-ribbons_6
Other DBs
NCBI-ProteinID: AVM44424
UniProt: A0A2S0KTU3
Position
1622751..1623575
AA seq 274 aa
MPELPEAENICRALKRVMAGRTITRVEVFTPAMREPLTPLLSAGLEGLKVVDVRRRARYV
VEELSDGRALLMHFGMTGVVRVESTDIPRRKHEHVFLHLDDGRAFRFECTRRFSVLKVCT
LPEPGGFPAELDAFGVEPLTPAFDGTHLFKRSRGKTVNVKCFLMDNVVVAGIGNIYATET
LFAANISPLRPAGKLTRRECGTLAAEAKRILARAIELGGSSISDFLNVDGTEGKFAQEIA
VYGRAGQSCPRCGGMIETVRLGGRSSAWCPNCQK
NT seq 825 nt   +upstreamnt  +downstreamnt
atgccggaattgccggaagccgaaaatatctgccgggccctgaagcgggtcatggcggga
cgcacgatcaccagagtcgaagtattcacccccgcgatgcgcgaaccgctgacgccgctc
ctctccgccggactcgaagggctgaaagtcgtcgacgtgcggcggcgcgcccgttacgtc
gtggaggagctgtcggacgggcgcgcgcttctgatgcatttcggcatgaccggcgtcgtg
cgcgtcgaatcaaccgatattccgaggcggaagcatgaacatgtgtttctgcatctcgac
gacgggcgtgcgttccgtttcgaatgcacgcgccgcttcagcgtgctgaaggtctgcacg
ctgccggagccgggcggtttcccggcggaactcgacgcattcggcgtcgaaccgctgacc
ccggctttcgatggaacacatctttttaagcgttcgcgcgggaaaaccgtcaatgtgaag
tgtttcctgatggataacgtggtggttgccggaatcggcaatatctacgcgacggagacg
ctgttcgccgcgaatatttcgccgctgcgtccggccgggaagctgacccgccgcgaatgc
ggcacgctggccgcggaggccaaacggattctggcccgggcgatcgaactcggcggcagc
tcgatctcggacttcctgaatgtggacggcacggaaggaaaattcgcgcaggaaatcgcc
gtctacggccgggccgggcaatcgtgcccgcgctgcggcggaatgattgaaacggtccgg
ctcggcggcaggagctccgcctggtgcccgaattgtcagaagtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (17)   

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