KEGG   Variovorax boronicumulans: CKY39_04510
Entry
CKY39_04510       CDS       T05068                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vbo  Variovorax boronicumulans
Pathway
vbo00300  Lysine biosynthesis
vbo00470  D-Amino acid metabolism
vbo01100  Metabolic pathways
vbo01110  Biosynthesis of secondary metabolites
vbo01120  Microbial metabolism in diverse environments
vbo01230  Biosynthesis of amino acids
Module
vbo_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    CKY39_04510
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    CKY39_04510
Enzymes [BR:vbo01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     CKY39_04510
SSDB
Motif
Pfam: DAP_epimerase
Other DBs
NCBI-ProteinID: ATA52559
UniProt: A0A250DF08
Position
999998..1000882
AA seq 294 aa
MRIRFTKMQGAGNDFVVLDETRGTLGLTAAQYRFLADRHFGVGADQILTVRPSPAEGIDF
QYVIHNADGGEVEQCGNGARCFMRFVSEHGLTEKKDVRVQTLAGVIEPRMGDDGRVTVDM
GAPVFEPVRVPFDTAGLDPQHEGAWQTWHLALGTRAGSAIVSVAVLSMGNPHAVQVVDNV
DTAPVAEQGPQIEHHPRFPQRVNAGFMQVVDRTHIKLRVFERGAGETLACGTGACAAVVA
GIRLGLLDSRVDVQTHGGILTIEWQGDGRPVLMTGPATTVFEGEIDVPDISEQP
NT seq 885 nt   +upstreamnt  +downstreamnt
atgcgaatccgctttaccaagatgcagggagccggcaacgatttcgtcgtgctcgacgaa
acgcgcggcacgctgggcctcacggccgcgcagtaccgcttcctggccgaccgccatttc
ggcgtcggcgccgaccagatcctcacggtgcgcccgtcgcccgccgagggcatcgacttc
cagtacgtgatccacaacgccgacggcggcgaggtggagcagtgcggcaacggggcgcgc
tgtttcatgcgcttcgtgagcgagcacggcctgaccgagaagaaagacgtgcgcgtgcag
acgctggccggcgtgatcgaaccccgcatgggcgacgatggccgcgtgacggtcgacatg
ggcgctccggtcttcgaaccggtgcgcgtgcccttcgacacggccgggctcgacccgcag
cacgaaggcgcgtggcagacctggcacctggcgctgggcacccgggccggcagtgctatc
gtttcggtagcggtgctgtccatgggcaacccgcacgcggtgcaggtggtcgacaacgtc
gacaccgcgcccgtggccgagcagggcccgcagatcgagcaccatccgcgttttccgcag
cgcgtgaacgcgggcttcatgcaggtggtcgaccgcacccacatcaagctgcgggtgttc
gagcgcggcgccggcgaaacgctggcctgcggcacgggcgcctgcgcggccgtggtggcg
ggcattcgcctcgggctgctggattcccgcgtcgacgtgcagacgcacggcggcattctc
acgatcgagtggcagggcgacggccggccggtgctcatgacaggaccggccacgacggtg
ttcgagggcgagatcgacgtgcccgacatttcggaacagccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (21)   

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