KEGG T05068: CKY39

Variovorax boronicumulans: CKY39_04530

Entry

CKY39_04530       CDS       T05068

Name

(GenBank) 23S rRNA (cytosine(1962)-C(5))-methyltransferase RlmI

K06969

23S rRNA (cytosine1962-C5)-methyltransferase [EC:2.1.1.191]

Organism

vbo Variovorax boronicumulans

Brite

KEGG Orthology (KO) [BR:vbo00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:vbo03009]
    CKY39_04530
Enzymes [BR:vbo01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.191  23S rRNA (cytosine1962-C5)-methyltransferase
     CKY39_04530
Ribosome biogenesis [BR:vbo03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CKY39_04530

SSDB

Motif

Pfam:

Methyltrans_SAM PUA_3 Methyltransf_31 MTS Methyltransf_11 Methyltransf_25 Cons_hypoth95 Met_10

Other DBs

NCBI-ProteinID:

ATA52562

UniProt:

A0A250DE74

Position

1003239..1004453

AA seq 404 aa
MKTLRLKPGKERSLQRRHPWVFESAIARGGADSGETVRVESHDGHFLAWAAFGPTSKIRA
RAWSFDEKQRIDAAFFSTVCARAVHARGLFDLQSDGVRLVHGEADGLPGLIVDRYGDTLV
AQFLSAGVERWKDVLADALLKATGLTRLYERSDASGREREGLKPVTGWLRGEGETQITIR
EHGWQLSLDIATGHKTGFYLDQRDSRQRFAELAQHRRFRRVLNCFCYTGGFTVAALAGLK
AAGALEGASLVSVDSSQPALERARAHLALNGFEGQGIATEFLDANVNTVLREFIDQGRTF
DAIVLDPPKFAPTVAHAERAARAYKDINRLALKLLEPGGVLLTFSCSGGISADLFHKIVA
SAGLDAGVDGYIAERLGAAPDHPMTIEFPEGEYLKGLVVVRKPL

NT seq 1215 nt +upstreamnt +downstreamnt
atgaaaaccctccgcctcaagccgggcaaggagcgctcgctccaacgccgccatccctgg
gtcttcgaatccgccattgcgcgcggcggcgcggactcgggggaaacggtgcgcgtggag
tcgcacgacggccactttctcgcgtgggcggccttcggcccgacctccaagatccgggcg
cgggcctggagctttgacgagaagcagcgcatcgacgctgcttttttttccacggtctgc
gcgcgcgcggtgcatgcgcgcggcctgttcgacctgcagagcgacggcgtgcggttggtg
cacggcgaggccgacggcctgccggggctgatcgtcgatcgctatggcgacacgctggtg
gcgcagtttctgtcggccggcgtggagcgctggaaagacgtgctggccgacgcgctgctc
aaggccacggggctcaccaggctgtatgagcgctccgacgccagcggccgcgagcgcgaa
ggcctgaagccggtcacgggctggctgcgtggcgagggcgaaacccagatcaccatccgc
gagcacggctggcagctgtcgctggacatcgcgaccggccacaagaccggcttctacctc
gaccagcgcgacagccgccagcgctttgccgagctggcgcagcaccggcgcttccgccgc
gtgctcaactgcttctgctacacgggcggcttcaccgtggccgcgctcgcgggcctgaag
gcggccggggcgctcgagggcgcctcgctggtgtcggtcgattcgtcgcagcccgcgctc
gagcgggcgcgcgcgcacctggcgctcaacggcttcgaagggcagggcattgccacggag
tttctcgatgccaacgtgaacacggtgctgcgcgagttcatcgaccagggccgcactttc
gacgccatcgtgctcgacccgccgaagttcgcgcccacggtggcgcacgccgagcgcgcc
gcgcgcgcctacaaagacatcaaccgcctggcgctcaagctgctggagcccggcggcgtg
ctgctcaccttttcctgctcgggcggcatcagcgccgacctgttccacaagatcgtggcc
tcggcggggctggacgccggtgtggacggctacatcgccgaacgcctgggcgccgcgccc
gaccacccgatgaccatcgagttcccggaaggggagtacctgaaggggctggtggtggtg
agaaagcccctgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (8)   
   Pfam (8)   
All databases (17)   

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