KEGG   Variovorax boronicumulans: CKY39_05770
Entry
CKY39_05770       CDS       T05068                                 
Name
(GenBank) penicillin-binding protein
  KO
K05366  penicillin-binding protein 1A [EC:2.4.99.28 3.4.16.4]
Organism
vbo  Variovorax boronicumulans
Pathway
vbo00550  Peptidoglycan biosynthesis
vbo01100  Metabolic pathways
vbo01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    CKY39_05770
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    CKY39_05770
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01003 Glycosyltransferases [BR:vbo01003]
    CKY39_05770
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vbo01011]
    CKY39_05770
Enzymes [BR:vbo01000]
 2. Transferases
  2.4  Glycosyltransferases
   2.4.99  Transferring other glycosyl groups
    2.4.99.28  peptidoglycan glycosyltransferase
     CKY39_05770
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     CKY39_05770
Glycosyltransferases [BR:vbo01003]
 Polysaccharide
  Bacterial polysaccharide (excluding LPS)
   CKY39_05770
Peptidoglycan biosynthesis and degradation proteins [BR:vbo01011]
 Peptidoglycan biosynthesis and degradation
  Glycosyltransferase/DD-Transpeptidase (Class A PBP)
   CKY39_05770
SSDB
Motif
Pfam: Transgly Transpeptidase PCB_OB
Other DBs
NCBI-ProteinID: ATA52774
UniProt: A0A250DES6
Position
complement(1286427..1288769)
AA seq 780 aa
MAVAFRVLGAGIAAAGLLSILCVVAVALAVAYPNLPDISELSDYRPKLPLRVFSAEGTQI
GEFGEERRNLTPIAAIPKVVKDAVLAAEDARFYDHGGVDYKGLVRAGLANLNRVKSQGAS
TITMQVARNVYLSSEKTLTRKIYEVLLTFKLEHLLTKDQIFEIYLNQIYLGNRAYGFAAA
SEAYFGKPLSEMTIAQAAMLAGLPKAPGANNPVNNPQRARGRQFYVIDRMQEAGFITAEQ
AAEAKKEELHLRDAADPNRLHAEYVAETVRQLMYAQYGDSTYTRGLKVYTSLVAADQAAA
YKALRKGIMDYERRQVYRGPEKFIDLPNDPKELDEAVDDVLNDHPDNGDVMAAVVLKATP
KEIQAIRANGDAVQITGDGLKPAQSGLSDKAPPNIKIRRGAVIRVAKTPKNTWEITQLPE
VEGAFVAMDPRDGAIKALVGGFDFGKNKFNHVTQAWRQPGSSFKPFIYSAALEKGFTPAT
VINDGPLFFDAGTTGGQPWEPKNYGGGFDGPMSMRTALMKSRNLVSIRILQSIGTRYAQD
WITNFGFDKDKHPAYLPMALGAGAVTPMQMAVGYSVFANGGYRVNPYLVTRVTDHKDRVL
VDVQPPLLNEASRAIPQRNAFIMDTLLQSITRAGTAAKAQAMLKRPDLYGKTGTTNDSLD
AWFAGFQPTMTAISWIGYDTPRNLGDRETGGGLSLPIWINYMETALKGVPVTDLSTTPPS
GIVSVGGEWYYDDYAPGRGVSSLGVESSAPVAPAEALSGPAISAPAPPEERNRILDLFRN
NT seq 2343 nt   +upstreamnt  +downstreamnt
atggctgttgcgtttcgtgttctgggggcgggcatcgctgcggcgggcctgctttccatc
ctgtgcgtggtggccgtggccctggcagtggcctatcccaacctgccggacatctcggaa
ctctccgactaccgacccaagctgccgctgcgcgtgttctccgccgaaggcacgcagatc
ggcgagttcggggaggagcgacgcaacctcacccccatcgccgcgatccccaaggtcgtg
aaggacgccgtcctggccgccgaagacgcccgcttctatgaccacggcggcgtcgactac
aaggggctagtccgcgccggcctcgccaacctgaaccgcgtgaagagccagggcgcctcc
accatcacgatgcaggtggcccgcaacgtctacctgagctccgagaagacgctgacccgc
aagatctacgaagtgctgctgaccttcaagctggagcacctgctcacgaaggaccagatc
ttcgagatctacctgaaccagatctacctgggcaaccgcgcctacggtttcgcggccgct
tccgaagcctacttcggcaagccgctgtccgagatgacgatcgcccaggccgccatgctc
gccggcctgccgaaggcgcccggcgcgaacaacccggtcaacaacccgcagcgcgcgcgt
gggcgccagttctacgtgatcgaccgcatgcaggaggccggcttcatcaccgccgagcag
gcggccgaggccaagaaggaagagctgcacctgcgcgacgccgccgacccgaatcgcctg
cacgccgagtacgtggccgaaaccgtgcgccagctgatgtacgcccagtacggcgacagc
acctacacgcgcggcctcaaggtctacacctcgctggtcgccgccgaccaggccgcggcc
tacaaggcgctgcgcaagggcatcatggattacgagcgccgtcaggtgtaccgcggcccc
gagaagttcatcgacctgccgaacgaccccaaggagctcgacgaagcggtggacgacgtg
ctgaacgaccaccccgacaatggcgacgtgatggcggccgtggtgctcaaggccacgccc
aaggaaatccaggccatccgggccaacggcgacgccgtgcagatcacgggcgacggcctc
aagcccgcgcagtccggcctgtcggacaaggcaccgcccaacatcaagatccgccgcggt
gccgtgattcgtgtcgccaagacccccaagaacacctgggaaatcacccagctccccgag
gtggaaggcgcgttcgtggccatggacccgcgcgacggtgccatcaaggcgctggtcggc
ggcttcgacttcggcaagaacaagttcaaccacgtcacacaggcgtggcgccagccgggt
tcgagcttcaagcccttcatctactcggcggcgctcgaaaagggcttcactcccgccacg
gtcatcaacgacggcccgctgttcttcgacgccggcaccaccggcggccagccctgggag
cccaagaactacggcggcggcttcgacggtccgatgtcgatgcgcacggcgctgatgaag
tcgcgcaacctcgtgtcgatccgcatcctgcaatccatcggcacgcgctacgcgcaagac
tggatcaccaacttcggcttcgacaaggacaagcaccccgcctacctcccgatggcgctc
ggtgccggtgccgtcacgccgatgcagatggcggtgggctactcggtgttcgccaacggc
ggctaccgcgtgaatccgtacctcgtgacccgcgtcaccgaccacaaggaccgcgtgctg
gtcgacgtccagccgccgctgctcaatgaagcctcgcgcgccatcccgcagcgcaacgcc
ttcatcatggacacgctgctgcagtccatcacgcgcgccggcacggccgcgaaggcgcag
gcgatgctcaagcgccccgacctctacggcaagaccggcaccaccaacgactcgctcgac
gcctggttcgcgggcttccagcccaccatgacggcgatctcgtggatcggctacgacacg
ccgcgcaacctgggcgaccgcgaaaccggcggtggcctgagcctcccgatctggatcaac
tacatggaaaccgccctcaagggcgtgcccgtgaccgacctgtcgaccacgccgccttca
ggcatcgtgagcgtcggcggcgagtggtactacgacgactacgcgccgggccgcggcgtg
tcgagcctgggcgtggaatcctccgcgccggtggccccggccgaagccctgagcggcccg
gcgatcagcgcgcctgcgccacccgaggaacgcaaccgcatcctcgacctgttcaggaac
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (17)   

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