KEGG   Variovorax boronicumulans: CKY39_13995
Entry
CKY39_13995       CDS       T05068                                 
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
  KO
K00281  glycine cleavage system P protein (glycine dehydrogenase) [EC:1.4.4.2]
Organism
vbo  Variovorax boronicumulans
Pathway
vbo00260  Glycine, serine and threonine metabolism
vbo00630  Glyoxylate and dicarboxylate metabolism
vbo00785  Lipoic acid metabolism
vbo01100  Metabolic pathways
vbo01110  Biosynthesis of secondary metabolites
vbo01200  Carbon metabolism
Module
vbo_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:vbo00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    CKY39_13995
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CKY39_13995
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CKY39_13995
Enzymes [BR:vbo01000]
 1. Oxidoreductases
  1.4  Acting on the CH-NH2 group of donors
   1.4.4  With a disulfide as acceptor
    1.4.4.2  glycine dehydrogenase (aminomethyl-transferring)
     CKY39_13995
SSDB
Motif
Pfam: GDC-P GcvP2_C Aminotran_5 Beta_elim_lyase Aminotran_1_2
Other DBs
NCBI-ProteinID: ATA54205
UniProt: A0A250DIL2
Position
complement(3040798..3043707)
AA seq 969 aa
MPIPALPSLQELENAEEFLARHIGIDAADEARMLPVIGSETRAELIDGIVPAAIRRARPM
RLPAPVTEADALAELKTLASKNKVFKSFIGQGYYGTHTPGVILRNILENPAWYTAYTPYQ
AEISQGRMEALLNFQTMVCDLTGMAIANASMLDEATAAAEAMTLAKRSVKSKSNVFLVSG
DCHPQTIEVIKTRAAPLGIEVKVSTVSETLPHLMVSGEFFGVLAQYPATTGHVHDLRPLA
GHAHQCDAAFIVAADLLALTLLVAPGEFDADIVCGTTQRFGMPLCNGGPHAAYLACRDSF
KRSLPGRLVGVSVDTHGQPAYRLALQTREQHIRREKATSNICTAQVLPAVVASMYAVYHG
PDGLTRIAQRVAVLTAILAKGLSQMGREPVNPTAFDSLTIRTGDDTAAIIERAQAGGVNL
RQRLQQHLGISLDETTTRADIETLWALFVPAGTAMPRFDELAASTTPLIPEDLRRTSAFL
THPVFNTHKSETAMLRYIRSLSDKDLALDRSMIPLGSCTMKLNATSEMIPITWPEFASIH
PFAPADQLQGYAQLDAQLRAWLCEATGYAGISLQPNAGSQGEYAGLLAIKSFHEAKGQGH
RNICLIPSSAHGTNPASAQMVGLQVVVTACDAQGNVDMDDLKRACEKHSAHLAAVMITYP
STHGVFETRVKELCELVHEHGGRVYVDGANMNALVGVAAPGEFGGDVSHLNLHKTFCIPH
GGGGPGVGPVCVVEDLVPYLPGHATAGVPSNGVGAVSAAPLGNAAVLPISWMYCRMMGAK
GLQAATETAILSANYISARLKDHYPTLYASPNGHVAHECILDLRPLKDTSGVTAEDVAKR
LIDYGFHAPTLSFPVPGTLMVEPTESEPLAELDRFVDAMIAIRGEIRRVEEGVWSKDDNP
LKHAPHTAASLLGTEWSHPYSRELGAFPLAALKQAKYWPPIGRVDNVYGDRNLFCSCVPV
GEYQETEEA
NT seq 2910 nt   +upstreamnt  +downstreamnt
atgccgattcccgcccttccctctttgcaagaactagagaacgccgaagaattcctcgcc
cgccacatcggcatcgatgcggcggacgaggcgcgcatgctgccggtgatcggctcggaa
acgcgcgcggagctcatcgacggcatcgtgcccgcggccatccgccgcgcccggccgatg
cgcctgcccgcgccggtcacggaggccgacgcgctggccgagctgaagacgctggcgtcg
aagaacaaggtgttcaagagcttcatcggccagggctactacggcacgcacacgccgggc
gtgatcctgcgcaacatcctggagaaccccgcctggtacaccgcctacacgccctaccag
gccgagatctcgcagggccgcatggaagccctgctcaacttccagacgatggtgtgcgac
ctcacgggcatggccatcgccaacgcctcgatgctcgacgaggccacggccgccgccgag
gccatgacgctcgccaagcgcagcgtgaagagcaagagcaacgtgttcctggtctctggc
gactgccacccgcagaccatcgaagtcatcaagacccgcgccgcgccgctgggcatcgaa
gtcaaggtgagcacggtgtcggaaacgctgccgcacctgatggtgagcggcgagttcttc
ggcgtgctcgcgcagtacccggccaccaccggccacgtgcatgacctgcgcccgctcgca
gggcacgcgcaccagtgcgacgccgccttcatcgtcgcggccgacctgctggcgctgacg
ctgctggtcgcccccggcgagttcgatgccgacatcgtctgcggcaccacacagcgtttc
ggcatgccgctgtgcaacggcggcccgcacgccgcctacctggcctgccgcgattcgttc
aagcgctcgctgcccggccgcctcgtcggcgtgagcgtcgacacgcacggccagccggcc
taccgccttgcgctgcagacgcgcgagcagcacatccgccgcgagaaggccacctcgaac
atctgcaccgcgcaggtgctgccggccgtggtcgccagcatgtacgccgtgtaccacggc
cccgacggcctcacgcgcatcgcgcagcgcgtggccgtgctcaccgcgatcctcgccaag
ggcctgtcgcagatgggccgcgagccggtgaaccccaccgccttcgactcgctgacgatc
cgcaccggcgacgacaccgccgcgatcatcgagcgcgcacaggccggcggcgtcaacctg
cgccagcgcctgcagcagcacctgggcatttcgctggacgagaccaccacgcgcgccgac
atcgaaaccctgtgggccctgttcgtgcctgccggcaccgcgatgccgcgcttcgacgag
ctggccgccagcaccacgccgctgattccagaggacctgcgccgcaccagcgccttcctc
acgcacccggtgttcaacacccacaagagcgaaacggcgatgctgcgctacatccgcagc
ctctcggacaaggacctcgcgctcgaccgcagcatgatcccgctgggcagctgcaccatg
aagctcaacgcgaccagcgagatgatccccatcacctggcccgagttcgccagcatccac
cccttcgcgcccgccgaccagctgcagggctacgcccagctcgacgcgcagctgcgcgcc
tggctgtgcgaggccaccggctacgcgggcatcagcctgcagcccaacgcgggctcgcag
ggcgagtacgcgggcctgctggccatcaagtccttccatgaagccaagggccagggccac
cgcaacatctgcctgattccctcgtcggcgcacggcaccaacccggccagcgcccagatg
gtgggcctgcaggtggtggtgacggcctgcgacgcgcaaggcaacgtcgacatggacgac
ctcaagcgcgcctgcgaaaagcacagcgcccacctggccgccgtgatgatcacctacccc
agcacgcacggtgtgttcgaaacccgcgtgaaggaactgtgcgagctcgtgcatgagcac
ggcggccgcgtgtacgtcgacggcgccaacatgaacgcgctggttggcgtggcggcaccg
ggcgagttcggcggcgacgtgagccacctgaacctgcacaagaccttctgcatcccgcac
ggcggcggcggcccgggcgtcggcccggtctgcgtggtcgaagacctcgtgccctacctg
ccgggccatgccacggccggcgtgccctcgaacggcgtgggcgccgtgtcggcggcgccg
ctgggcaatgcggccgtgctgccgatcagctggatgtactgccgcatgatgggcgccaag
ggcctgcaggccgcgaccgaaacggccatcctgagcgccaactacatcagcgcgcgcctg
aaggaccactaccccacgctgtacgcgagccccaacgggcacgtcgcgcacgagtgcatc
ctggacctgcgcccgctcaaggacaccagcggcgtgactgccgaagacgtggccaagcgc
ctgatcgactacggcttccacgcgcccacgctgagcttccccgtgcccggcacgctgatg
gtggaacccaccgaaagcgaaccgctggccgagctcgaccgcttcgtcgacgcgatgatc
gccatccgcggcgagatccgccgcgtggaagaaggcgtctggtcgaaggacgacaacccg
ctcaagcacgcgccgcacaccgccgccagcctgctgggcacggagtggagccacccgtac
tcgcgcgaactcggcgcgttcccgctggccgcactcaagcaggccaagtactggccgccg
atcgggcgcgtcgacaacgtctacggcgaccgcaacctgttctgcagctgcgtgccggtg
ggcgagtaccaggaaaccgaagaggcctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (6)   
   KEGG MODULE (2)   
Chemical substance (10)   
   KEGG COMPOUND (10)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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