KEGG   Vibrio breoganii: A6E01_11880
Entry
A6E01_11880       CDS       T04649                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
vbr  Vibrio breoganii
Pathway
vbr02024  Quorum sensing
vbr03018  RNA degradation
vbr05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vbr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    A6E01_11880
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    A6E01_11880
   05111 Biofilm formation - Vibrio cholerae
    A6E01_11880
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vbr03019]
    A6E01_11880
   03036 Chromosome and associated proteins [BR:vbr03036]
    A6E01_11880
Messenger RNA biogenesis [BR:vbr03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     A6E01_11880
Chromosome and associated proteins [BR:vbr03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    A6E01_11880
SSDB
Motif
Pfam: Hfq LSM
Other DBs
NCBI-ProteinID: ANO33865
UniProt: A0A193KEY6
Position
1:complement(2568034..2568294)
AA seq 86 aa
MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS
TVVPARAVTHHSSNERADRTQEKSED
NT seq 261 nt   +upstreamnt  +downstreamnt
atggcaaaggggcaatctttacaagacccattcttaaacgcattgcgtcgtgagcgcgtg
ccggtttctatttatcttgtcaatggcatcaagcttcagggtcagatcgagtcttttgac
caatttgtgatcctactgaaaaataccgttaatcagatggtatacaagcatgctatttcg
acagtagttcctgcacgagcagtaactcatcacagcagcaatgaacgtgcagatcgcact
caagagaaatctgaagactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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