KEGG   Vibrio breoganii: A6E01_19580
Entry
A6E01_19580       CDS       T04649                                 
Name
(GenBank) hypothetical protein
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
vbr  Vibrio breoganii
Pathway
vbr03030  DNA replication
vbr03410  Base excision repair
vbr03420  Nucleotide excision repair
vbr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:vbr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    A6E01_19580
   03410 Base excision repair
    A6E01_19580
   03420 Nucleotide excision repair
    A6E01_19580
   03430 Mismatch repair
    A6E01_19580
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vbr03032]
    A6E01_19580
   03400 DNA repair and recombination proteins [BR:vbr03400]
    A6E01_19580
Enzymes [BR:vbr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     A6E01_19580
DNA replication proteins [BR:vbr03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     A6E01_19580
DNA repair and recombination proteins [BR:vbr03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     A6E01_19580
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     A6E01_19580
   MMR (mismatch excision repair)
    DNA ligase
     A6E01_19580
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      A6E01_19580
SSDB
Motif
Pfam: DNA_ligase_aden DNA_ligase_OB BRCT HHH_2 Glucodextran_N
Other DBs
NCBI-ProteinID: ANO35416
UniProt: A0A193KJ22
Position
unnamed1:complement(126934..128922)
AA seq 662 aa
MLLITATTTTEVYRIMSNSPIREEIREERKWGGITLTGETAFDSQKLFAELEKHDYLFFT
GKPEISDIEYDHLCAEARSVEPNHPYFNKVGYKVVDGSIAHIIPMLSTEKAYSYDEVSKW
IAKVEKARESLNYPSTQIKCTPKLDGVAACYDADNRTLATRNDGGSGANISQLLDLNLTI
IGDASQSGAGEIVVNNDFFNKYLSEHFANPLSAVAGLVTSQTPNRHLQFALSQGAIELVL
FKDLDCAQFIDIADATSSNLEALELKCREIGSRYAIDGVVFEIANEMVKNQMGTATTYHR
WQIAKKVRGEDYRTIVTDIIFQIGRTGKHSPVLCYNDVIMKGATHNRATAHHCGSLLVRG
IGIGSEISVTKSGEIIPFVTQVHTHGEPAIPTHCLCCETELVWSYDKESKNPTFLTCPNE
GCESRIERSIIHHFKTLKINGFGDKTVKKLVDKLELTTLSDVYSLTLNDYLSAGVGIGDA
TNLITDIKKATTSPMPDYLLLGSLGIGKLGRGSSKKLLAVHRIDTLKEISRNDILSIKDF
GNVTSDNTFMAMQTTKGNDLSILLENYQSIIHTQDAAIEAQSLLESSTSSLAGKRVVFTG
KCSKGRDDMGSEAESYGLIHQKRVTADTDILVYGEKAGETKLQAARNKGVTVITEADYRQ
QL
NT seq 1989 nt   +upstreamnt  +downstreamnt
ttgctactcataaccgcaaccaccactacagaggtctacagaattatgtcaaactcccca
atcagagaagaaatccgtgaagaacgcaaatggggtgggattacccttactggtgaaacc
gcatttgattcacaaaagctattcgctgaactagaaaaacacgattaccttttctttact
ggtaaacctgaaatctctgacattgaatacgatcatctttgtgcagaagctcgctcagtt
gaacccaatcacccttacttcaataaggtcggttacaaagtagttgacggctctattgct
cacatcatcccaatgctttcgactgagaaagcctactcttacgatgaagtgtccaaatgg
atagcaaaggtagagaaagcacgagaatcactcaactacccttcaacccaaatcaaatgc
accccaaagctcgatggtgtcgctgcgtgctatgacgccgacaatcgcactctagccact
cgcaacgatggtggctctggcgcgaacatctcacaactgctcgatcttaacctaaccatc
attggtgatgcgtcgcaaagtggcgctggcgagatcgtcgttaacaacgacttcttcaat
aagtatctttcagaacactttgctaacccgctttctgcggttgccgggcttgtgacttct
caaactcccaaccgtcacttgcagttcgccctctcacaaggcgctattgagctagtcctg
ttcaaagaccttgattgcgcgcagttcatcgacattgcagacgccaccagcagcaatctc
gaagcactggaacttaaatgccgtgaaatcggatcgagatacgcaattgatggcgtcgta
ttcgaaatcgccaatgaaatggtcaaaaaccagatgggtactgccacaacgtatcatcgc
tggcagatagccaaaaaagtgcgtggtgaagattacagaacaattgttaccgacatcatt
ttccagatcgggcgcacaggtaagcacagcccggtactttgctataacgatgtaattatg
aagggagcaacccacaaccgagcgaccgctcatcactgtggatcactattagtcagaggc
attggtattggctctgaaatctcagtaacaaaatcgggtgaaatcattcctttcgtcact
caagttcatactcatggtgaacccgctatcccgactcactgcctatgctgtgaaacggaa
ctggtatggagctacgataaggaatcaaagaatccgacattcctcacatgcccaaatgaa
ggctgtgaaagtcgaattgaaagaagcattattcatcactttaagaccctcaaaatcaac
ggctttggtgacaagaccgtcaagaagctggtggacaaactagaactgacaacgcttagt
gacgtgtattcgttgactttaaatgactacctaagtgccggtgttggcattggcgatgct
acgaacttgatcaccgacatcaagaaagccacgacctcaccaatgcccgattaccttcta
ctcggctctttaggcatcggtaaacttggaagaggctcaagtaagaagctattagcggta
caccgaattgatacactaaaggaaatctctcgcaatgatattctgagcattaaagacttc
gggaatgtgacttctgataacaccttcatggcaatgcaaaccacaaaaggcaacgacctt
agtattctacttgagaactatcaaagcatcattcacacacaagatgccgcaatagaagct
caaagcctactggaatcatccacaagttcactggctggcaaacgagtagtatttactggt
aaatgctcaaaaggtcgtgacgacatgggtagcgaagctgaaagttatggtcttatccac
caaaaacgagtgacggcagataccgacatccttgtgtacggtgagaaggcaggtgaaact
aaactgcaagcggctcgaaacaaaggcgtcactgtaatcacagaagccgattaccgccaa
caactataa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (25)   

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