KEGG   Verrucomicrobia bacterium S94: EGM51_02340
Entry
EGM51_02340       CDS       T05990                                 
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
vbs  Verrucomicrobia bacterium S94
Pathway
vbs00300  Lysine biosynthesis
vbs00470  D-Amino acid metabolism
vbs01100  Metabolic pathways
vbs01110  Biosynthesis of secondary metabolites
vbs01120  Microbial metabolism in diverse environments
vbs01230  Biosynthesis of amino acids
Module
vbs_M00527  Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:vbs00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    EGM51_02340
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    EGM51_02340
Enzymes [BR:vbs01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     EGM51_02340
SSDB
Motif
Pfam: DAP_epimerase Pro_racemase Ligase_CoA_2
Other DBs
NCBI-ProteinID: QBG46296
UniProt: A0A4P6PER1
Position
525578..526372
AA seq 264 aa
MIIPFHKMQGAGNDFMVIDDSGLQFPLADTEFIRRIAARRTGVGCDGILLIQPSETADFR
MRFINPDGGEVDMCGNGARCIARRAYDLGIVSPEMVFDTGAGRVEARVLDEQVRVGLTEP
EDLRLGLDAGLDRPVDFINTGVEHAVVWVDAPAETDVSVLGEKIRYHQLFMPRGTNADFA
KVEPDGSITLRTYERGVEAETLACGTGAAAVGLIGAERGWVSLPVRVHCAGGYDLVIDLF
CGKVTLTGDAEYVFEGTVEYGDRF
NT seq 795 nt   +upstreamnt  +downstreamnt
atgattattcctttccataaaatgcagggggccgggaacgattttatggtgatcgatgat
tccggcctgcagtttcctctggcggataccgaatttatacggcggattgcagcgcgccgt
accggtgtcggctgtgacggaattctgttgattcagccctctgagacggccgatttccgg
atgcggtttatcaatcctgacggcggtgaagtggatatgtgcggaaatggtgcgcggtgt
attgcacggcgggcgtatgatctgggcattgtatcgccggaaatggtttttgataccggg
gcgggaagggttgaggcccgggtgctggatgagcaggtccgggtgggtttaaccgagccg
gaagatctgaggctgggactggatgccggactggatcggccggtggattttatcaacacc
ggtgtggaacatgccgtcgtctgggtggatgctccagctgaaaccgatgtttcggtgctt
ggagaaaaaatccggtatcatcagctgtttatgcctcggggaaccaatgccgatttcgcg
aaggtggagccggatgggtcgattacgctacgcacctatgagcgcggggttgaggcggaa
acactggcctgcggaaccggcgcggcggcggtcgggctgatcggagctgaacggggctgg
gtcagtttgccggttcgcgtgcattgcgccggcgggtatgatctggtaattgatttgttt
tgcggtaaggtcacgctgaccggtgacgcggagtatgtttttgaagggacggtcgaatat
ggagatcggttttag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (6)   
   KEGG MODULE (3)   
Chemical substance (2)   
   KEGG COMPOUND (2)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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