KEGG   Vibrio campbellii ATCC BAA-1116: M892_08390
Entry
M892_08390        CDS       T02837                                 
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
  KO
K01925  UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:6.3.2.9]
Organism
vca  Vibrio campbellii ATCC BAA-1116
Pathway
vca00470  D-Amino acid metabolism
vca00550  Peptidoglycan biosynthesis
vca01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:vca00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    M892_08390 (murD)
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    M892_08390 (murD)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:vca01011]
    M892_08390 (murD)
Enzymes [BR:vca01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.9  UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
     M892_08390 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:vca01011]
 Precursor biosynthesis
  Amino acid ligase
   M892_08390 (murD)
SSDB
Motif
Pfam: MurD-like_N Mur_ligase_M Mur_ligase_C NAD_binding_9 NAD_binding_7 Lycopene_cycl DAO Thi4 TrkA_N NAD_binding_8
Other DBs
NCBI-ProteinID: AGU94641
Position
I:complement(1833984..1835297)
AA seq 437 aa
MERWQNIHKVVVVGLGITGLSVVKHLTKTQPQLTVKVIDTRATPPGTERLPEQVELHSGG
WNTEWLAEADLVVTNPGIALATPEIQEVLAKGAPVVGDIELFAWAVDKPVIAITGSNGKS
TVTDLTGVMAKAAGLTVGVGGNIGVPALDLLEQDADLYVLELSSFQLESTLSLKLKAAAF
LNLSEDHMDRYEGMSDYRQAKLRIFDNAELAVVNRDDQETFPDTETPLVTFGSDEQAYGL
EADGNRTWLLDHGQRVIASDELKLVGKHNLANALVVLALLKAADVDYHKSLNALKTYTGL
THRCQVVADNRGVKWVNDSKATNIASTIAALSGLESTGKLYLLVGGVGKGADFTPLKPIF
ATLNLQLCCFGADGDEFMPLHESATRFDTMEDVIQQISSQLKTGDMVMLSPACASFDQFD
NFMARGDAFAALAEKYA
NT seq 1314 nt   +upstreamnt  +downstreamnt
atggaacgttggcaaaacatacataaggtcgtcgttgtagggctcggtattaccgggctc
tctgtcgttaaacacctaacaaaaacacagccgcaactgacggttaaagtcatcgataca
cgtgcgactcctccgggaactgagcgcttaccagagcaagttgaactgcacagcggtggt
tggaatactgagtggcttgcagaggccgacttagtggtgactaacccgggtattgcctta
gcgacaccagagatacaagaggttcttgcgaaaggagcgccagttgttggtgatatcgaa
ctcttcgcgtgggcagtcgataagccagttattgcgattaccggttctaatggtaaaagc
acagttactgacttaacgggtgtaatggcgaaggctgcaggcttaacagtgggtgttggt
ggcaatatcggtgttcctgctctcgatttgctagagcaagatgcagacttgtatgtgctt
gagttgtccagtttccagctcgaaagcactttaagcctgaagcttaaagcggcggcgttt
ctgaacctttccgaagatcacatggatcgctatgagggcatgtcggactaccgacaagct
aaactgcgcatttttgataacgcggagctggcagtagttaaccgtgatgatcaagaaacc
ttccctgatactgaaacaccgttggtgacgttcggaagtgatgagcaagcttacggcctt
gaagcagatggtaaccgtacttggttgcttgatcatggtcagcgtgtgattgccagtgat
gaattaaagctggttggtaagcacaatctagctaacgcgcttgtggtacttgctctgctt
aaagcggcggatgtggactatcacaaatcattgaatgcactgaaaacttacacgggtttg
acacatcgatgccaagtggttgcggataatcgtggcgtaaaatgggtgaatgactctaaa
gcgaccaatattgcgagcactatagctgcactctctggcttggagtcgacaggcaagctg
tacttgcttgttggtggagttggcaaaggtgctgacttcactccactaaaaccgatcttc
gcaacactgaacctacaactttgctgctttggcgcggatggcgatgaatttatgccactg
catgaatcagcaactcgtttcgacaccatggaagatgtgattcaacagatatcttcgcag
ttaaaaacgggcgatatggtgatgctgtctccggcatgtgctagctttgatcaattcgac
aactttatggcaagaggtgacgcattcgctgctcttgctgagaaatacgcataa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (10)   
   Pfam (10)   
All databases (28)   

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