KEGG   Vibrio campbellii ATCC BAA-1116: M892_09235
Entry
M892_09235        CDS       T02837                                 
Name
(GenBank) primosome assembly protein PriA
  KO
K04066  primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:5.6.2.4]
Organism
vca  Vibrio campbellii ATCC BAA-1116
Pathway
vca03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vca00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    M892_09235
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vca03400]
    M892_09235
Enzymes [BR:vca01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     M892_09235
DNA repair and recombination proteins [BR:vca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     M892_09235
SSDB
Motif
Pfam: PriA_3primeBD PriA_C DEAD ResIII Helicase_C PriA_CRR PriA-like_WH AAA_30 AAA_19 zinc-ribbons_6 cobW TrwB_AAD_bind TrmB zf-CHY HypA
Other DBs
NCBI-ProteinID: AGU94788
Position
I:2006507..2008708
AA seq 733 aa
MRPSIARVALPVPLDKQFDYVIPSHLFPVIGGRVSVPFGRQTLVGIVTAMVNHSDFPKEQ
LKAIKAVLDAQPVWPEKLYSLLTWCSQFYQYPLGDTLHNAMPAALRKGKPADFATLQEWQ
ITASGKDKLMQGLGRAVKQQRALQMLVNGSVPHQEFIDQDIGSTVLKSLEEKGWVELIEK
KPTITKWGQQVEFDVEKPKLNHEQALAIASVNSQTGFACYLLEGVTGSGKTEVYLNLIKP
VLEQGKQALVLVPEIGLTPQTINRFKRRFNVPVDVIHSGLNDTERLNAWLSARDKAAGII
IGTRSALLTPFADLGIIIVDEEHDSSYKQQDSLRYHARDVAVMRAHKEQVPIVLGSATPA
LETLHNALTGKYHHLTLTQRAGSAVPTTNKVLDVKGLYLDSGLSAPLIAEMRKHLKAGNQ
VMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSNEIRCHHCGSQQPVINQCQGCG
STQLVTVGVGTEQLELQLAELFPEYKAIRIDRDSTRRKGSLEDALESIRKGEYQILIGTQ
MLAKGHHFPNVTLVALLDVDGSLYSSDFRASERLAQLFIQVAGRAGRASKPGEVILQTHH
PEHSLLQALLQKDYRHFAMTALEERKLAQLPPYSFLTLFKAEANQSEVVEDFLRQVRFTL
ESHPLFDDSCMVLGPTPSPLAKRAGKYRWQLLLQTQHRSLMQKLLTSAKPAIELLPNAKK
VRWNLDIEPQDLS
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgcgtccatccatcgcccgagtagcactgccagtcccgctcgacaaacagtttgactat
gtcatacctagtcaccttttccctgtgattggcggacgcgtttctgtgccttttggtcgg
cagactttggttggcatcgtgaccgccatggtaaatcattcagactttcctaaagagcaa
ctgaaagcgattaaagcggtattagatgcccaaccagtttggccagaaaaactctattct
ttactgacttggtgcagccagttttatcagtatccacttggtgacacacttcataatgca
atgcctgctgccctgcgtaagggaaaacctgccgatttcgcgacattacaagagtggcaa
atcactgcgtcgggtaaagataagctgatgcaaggcttagggcgtgcagtcaagcaacag
cgtgctttgcagatgctggtcaatggttcagtgccacaccaagagttcatcgaccaagat
attggctctaccgtacttaagtctttggaagagaaaggctgggtcgaactcatagagaaa
aaaccgacgatcactaagtggggtcaacaagttgagtttgatgttgaaaaaccaaagctc
aaccacgaacaagctctggcgattgctagcgtaaacagccaaaccggctttgcctgctat
ttattagagggcgttacaggttccggcaaaaccgaagtttaccttaacctcattaagcca
gtacttgaacaaggtaagcaagctttggtgctcgtccctgagataggcctgacgccccaa
actattaaccgcttcaagcgtcgctttaatgtgcctgtggatgtcattcactctgggtta
aatgataccgagcgactcaacgcttggctttctgcgcgagacaaagccgctggcatcatt
attggtacgcgctctgccctactaacgccttttgctgatcttggcattatcattgtcgat
gaagaacacgactcgtcttataaacaacaagatagcctgcgctaccatgctcgtgatgtt
gcggtgatgcgtgcacataaagagcaagtgcctattgtcctcggctctgccacaccagcc
ttagaaacactgcacaatgcactaacgggcaagtaccaccatttaactctgacgcaacgc
gccggttctgccgttccgaccactaacaaggtacttgatgttaaaggcctctatctagac
agtggcttatctgcgccattgattgctgaaatgcgcaaacatctaaaagcgggcaaccaa
gtgatgctgttcttaaaccgtcgcggcttctcaccagcgttaatgtgccatgaatgcggc
tggattgcggaatgtaaacgctgtgatgcttactacaccttccaccagtacagcaatgag
attcgctgtcaccattgtggctcacagcagcctgtgattaatcagtgccaaggttgtggt
tcgactcagttggtcacggtgggtgtgggtaccgaacagcttgagttgcaactggctgag
ctcttcccagaatacaaagccattcgcattgatagagacagcacgcgccgtaaaggcagt
ttagaagatgcgctcgaatcgattcgtaaaggcgaataccaaattctgattggcacgcag
atgttagcaaaaggccaccacttcccaaatgtgacgcttgttgcgctactcgatgttgat
ggctccctctacagtagtgacttccgcgcctccgagagactggctcaactgtttattcag
gtagcaggccgcgcaggccgcgcaagcaaacccggtgaagtgatattgcaaactcaccac
ccagaacacagtttactgcaggctctactacagaaagactatcgccactttgctatgacc
gcattggaagagcgtaaactcgcccaactgccaccgtatagcttcttgaccttatttaaa
gcagaagcgaaccaaagcgaagtggtcgaagactttttacgtcaggtgcgttttaccctt
gaatcacacccattgttcgatgatagctgtatggtattgggaccgacaccttcaccactg
gctaagcgcgctggcaaatatcgatggcagcttttactgcaaactcagcatcgctcattg
atgcaaaagttattaaccagtgcgaaacctgctattgagttgttgccaaatgccaagaaa
gttcgctggaatttagacatagagccacaggatctcagctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (24)   

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