KEGG   Vibrio campbellii ATCC BAA-1116: M892_11585
Entry
M892_11585        CDS       T02837                                 
Name
(GenBank) transcriptional regulator
  KO
K05787  DNA-binding protein HU-alpha
Organism
vca  Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:vca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vca03032]
    M892_11585
   03036 Chromosome and associated proteins [BR:vca03036]
    M892_11585
   03400 DNA repair and recombination proteins [BR:vca03400]
    M892_11585
DNA replication proteins [BR:vca03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    M892_11585
Chromosome and associated proteins [BR:vca03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    M892_11585
DNA repair and recombination proteins [BR:vca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      M892_11585
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1
Other DBs
NCBI-ProteinID: AGU95086
Position
I:2507636..2507908
AA seq 90 aa
MNKTQLIDFIAEKADLSKAQAKAALEATLEGVTGALKEGDQVQLIGFGTFKVNHRAARTG
RNPKTGDEIQIAAANVPAFVAGKALKESVN
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagacccaattaatcgactttattgcagagaaagcagacctatctaaagcacaa
gctaaagctgctcttgaagcaactcttgagggtgttactggcgctcttaaagagggtgac
caagttcaactaattggttttggtacattcaaagtaaaccaccgtgctgcacgtactggt
cgtaaccctaagactggtgacgagattcaaatcgcagcagctaatgtacctgcattcgta
gcaggtaaagcgctgaaagaatcagtaaactaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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