KEGG T02837: M892

Vibrio campbellii ATCC BAA-1116: M892_14120

Entry

M892_14120        CDS       T02837

Symbol

truB

Name

(GenBank) tRNA pseudouridine synthase B

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

vca Vibrio campbellii ATCC BAA-1116

Brite

KEGG Orthology (KO) [BR:vca00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vca03016]
    M892_14120 (truB)
Enzymes [BR:vca01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     M892_14120 (truB)
Transfer RNA biogenesis [BR:vca03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    M892_14120 (truB)
Prokaryotic type
    M892_14120 (truB)

SSDB

Motif

Pfam:

TruB_N TruB_C_2 TruB-C_2

Other DBs

NCBI-ProteinID:

AGU95449

Position

I:3046198..3047142

AA seq 314 aa
MARRRKGRPINGVILLDKPTGISSNDALQKVKRIFFAEKAGHTGALDPLATGMLPICLGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVETRPVDVNLEKLEACIDTFRGESDQ
VPSMFSALKYQGKPLYEYARKGIEVPRESRKITVYEIILHRFEGDEVEMEVHCSKGTYIR
TIVDDLGEMLGCGAHVTMLRRTGVAKYPYEKMVTLEQLNELLEQAHRDEVAPKELLDPLL
LPMDTAVEDLPEVNLKAELTNLVQHGMPVQVLGAPEGTPIRMTSGEDKLFIGVAEVNDDG
KVAPKRLVVFRDEE

NT seq 945 nt +upstreamnt +downstreamnt
atggctcgtcgtcgtaaaggtcgtccaattaatggcgttatcttgttggacaaaccaaca
ggtatttcttccaatgatgcactgcaaaaagtaaaacgtattttctttgctgaaaaagca
ggtcatacgggtgcattggacccactagcgacgggcatgttgccaatctgcttaggcgaa
gcaactaagttctctcagttcttgttggattcagacaaacgctatcgcgtaatcgcaaag
ttgggtgagcgtactgatacgtctgactctgatggcgaagtggtagagacgcgtccagtt
gacgtgaaccttgagaagttagaagcgtgcatcgacacgttccgtggtgaatcagaccaa
gtaccttcaatgttctctgcattgaaataccaaggtaagccattgtacgagtacgctcgt
aaaggcattgaagtgccacgtgaatctcgcaagatcaccgtatacgaaatcatacttcac
cgctttgaaggtgacgaagttgagatggaagtacactgctcgaaaggcacttacatccgt
actatcgttgatgacctaggtgaaatgcttggttgtggtgcacacgtgaccatgcttcgt
cgtacgggtgttgctaagtacccatacgaaaaaatggtgacgctagaacaacttaatgag
ttacttgagcaagcacatcgcgatgaagtagcaccgaaagagttgcttgatccactgctg
ttgccaatggacactgccgttgaagatttgcctgaggtaaacctaaaagctgagctaacc
aacttagtacaacacggtatgccagtgcaggtactgggtgcgccagagggtacgccaatt
cgtatgacttctggtgaagataagctgtttattggcgttgctgaagtgaacgacgatgga
aaagtggcaccaaaacgtttggtggttttccgcgacgaagagtaa

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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