KEGG   Vibrio campbellii ATCC BAA-1116: M892_23365
Entry
M892_23365        CDS       T02837                                 
Name
(GenBank) exonuclease SbcC
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
vca  Vibrio campbellii ATCC BAA-1116
Brite
KEGG Orthology (KO) [BR:vca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vca03400]
    M892_23365
DNA repair and recombination proteins [BR:vca03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     M892_23365
    Archaeal homologous recombinant proteins
     M892_23365
SSDB
Motif
Pfam: AAA_23 SMC_N SbcC_Walker_B AAA_29 AAA_21 AAA_16
Other DBs
NCBI-ProteinID: AGU97604
Position
II:complement(1208146..1211202)
AA seq 1018 aa
MKPIKLTMQAFGPFAQTETIEFDKLGTNPLFLINGPTGSGKTSILDAICFALYGETTGNE
RQGIQMRCDMAAPTLLTEVTLEFSLHGKSYRVIRSPEQEAPKARGEGMTVRKHTAALYEV
TDEEKLITSKTTQVKTEVTNIVGLNETQFRQVMVLPQGKFRELLLATSKEREEIFGQLFQ
TDIYKKIEYALKDKASTISKAKDEFDNQIRGALQVAGVSSEAELTEQREALSVQFESVQK
QEQESLAQLNAVKTELQKAEALSNEFKKREQAEIALKRHLEQSDAVSSRQLQLDNAKKAS
KVELPYVTLQNASKQTQELEQKVAKLSQDLTVANDAVKSKEGALQTAKEQAAQLPKLTEQ
QYQLEGMKGKLVEKSELEKAINAGLTQKSEFEATLKKYIALKEKLTLEAQRGQKSLDQAR
VDVASIGSVEAEIKQQQRLMQDLQKLTGLNQELAKLDALTPSKQALFDQAKARYVELQRS
ADTLELSWHNAQAAVLAQRLQAGEMCPVCGSVEHPQPAQFVGEEVTKEQVQRARNTEREG
QVALNQLSNQLEQHNIAVGQYKQQIEQLSVELGQNASMDLSALQASMQQLNERLQQLSSI
NLVQLEQSVNELNQRCVTGESKINDLQNQMAANESTIKGNQEQLAKLSASLDAKYSSLEV
LEQDIVVIQKQITELNTAFESAQNHLQQAVLAKTNIESQLTTNQQWLNEALERLNTAKTD
WAQSLQASAFEDEAQFLASKVDEAEMQVWQQEIEAFKQTQIKLEQTLADLSSTLKDLALP
DLEGFNVKLNSVQQSYVEARNQLDSTRSLFERLEKVRNDIATLHDKNTKLEDEYKVFGTL
YDVASGKTGSRISLHRFVLGVLLDDVLIQASQRLSLMSKGRYILARKTEGFKGAAGRGLD
LVVEDSYTGKTRDVATLSGGESFMAALALALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLVDLQQTGRMIGVISHVSELKEQMAQRIDVEPSRLGSTVSVKSQMAFDS
NT seq 3057 nt   +upstreamnt  +downstreamnt
atgaaacccattaaactgacaatgcaggcttttggtccgtttgctcaaacagaaacgatt
gaattcgacaagctgggtactaaccctctgtttcttatcaatggtcctactggttcgggt
aaaacctcgattctcgatgcgatttgttttgctctctatggtgaaacgacgggtaatgag
cgccaaggtattcaaatgcgttgcgatatggcagcaccaacgttattgaccgaagtgacg
ctagagttctctttacacggcaagtcttatcgagtgattcgctcaccagaacaagaagca
ccaaaggcgcgtggtgagggcatgacggtgcgtaagcataccgcagctttgtatgaggtt
acggacgaagaaaagctcatcaccagcaaaacaacgcaagtaaagacagaagtgaccaat
atcgttggcttgaacgaaactcagttccgccaagtgatggtgttgccacaaggaaagttt
cgagagttgttacttgcgacatccaaagagcgggaagagatctttggtcagctattccaa
acggatatctacaagaagattgaatacgcactgaaagacaaagcgagtactattagcaaa
gccaaagacgagtttgataaccaaattcgaggcgcacttcaggtggctggtgtttcttca
gaagcggagttgacagagcagcgcgaagccttatctgttcaatttgaatctgtacaaaag
caagagcaagaatctctggcgcaattaaatgcggtaaaaacggaactgcaaaaagcagaa
gcattgagcaatgagttcaaaaagcgcgagcaagccgaaattgcattgaagcgacattta
gaacagagcgatgctgtctcatcacgtcaattgcagttagacaatgcgaagaaggcaagc
aaggttgagttgccttatgtcacgttacaaaatgcctcaaagcaaacgcaagaacttgag
caaaaggtggctaagctttctcaagatcttactgtggcaaatgacgcggtaaaatccaaa
gaaggcgcattgcaaaccgcgaaagaacaagccgctcaattgccaaaactgacagagcag
caataccaacttgaaggcatgaaaggaaagttggttgaaaagtcagagctagagaaagcc
attaacgcaggtttgacgcaaaagtcggagtttgaggcaacgcttaagaaatatatcgct
ctgaaagagaagttaacgctagaggcgcaacgaggtcagaagtctctggatcaagcccga
gtcgatgttgcaagtattggcagtgtagaggctgagataaaacagcaacaacgtttgatg
caagacctacagaaactaactggcttaaaccaagagctagcgaaattggatgcattgacg
cctagcaagcaagctttgtttgaccaagcaaaagcgcgatacgtagaacttcaacgctca
gcagatacacttgaattgagctggcacaatgctcaagctgctgtattggctcagcgctta
caagccggtgaaatgtgtccagtatgcggtagtgtagaacaccctcaacccgctcaattt
gttggtgaagaggtaacaaaagagcaagttcagcgtgctcgaaatacggagcgagaaggg
caagttgcgcttaaccaattgagcaatcaattggagcagcacaatatcgcagtcggacaa
tacaaacagcagatagagcaactatccgttgaacttggccaaaacgcatcgatggattta
agcgcgttacaagcgtccatgcagcagctcaatgaacgtttacagcaattgtcatcgatt
aacttggttcagctggaacaaagtgtcaatgagttaaaccagcgttgtgttactggggaa
agtaagatcaatgatctgcaaaaccagatggcagcgaatgaatcgacgataaaagggaac
caagagcaactggctaaactgtctgcttcgttagatgccaagtactcatctcttgaagtt
cttgagcaagacattgttgtgattcaaaaacagattacggagttgaataccgcattcgag
tctgcacaaaaccatttacaacaagccgtgctggcgaagaccaatattgaaagccaactg
acaaccaatcaacagtggttgaatgaggcactagagcgtttgaacacagccaaaactgat
tgggcgcaatcgttgcaggcgagcgcattcgaggatgaagcacaattcctagcaagtaaa
gttgatgaagctgagatgcaggtttggcagcaagaaattgaggcgttcaaacagactcaa
atcaagctagaacaaaccttggcagacttgagctccacgttgaaagacctggcgttacct
gatttagaagggtttaacgttaaattaaacagtgtccagcaaagttacgttgaagcgcgt
aatcagcttgatagcacgcgctctttgtttgaacgtctagagaaagtccgtaatgacatc
gcgacgttacatgacaagaacaccaagttagaagacgaatacaaagtgtttggcaccttg
tatgacgttgcaagcggtaaaacgggtagccgtatcagtttgcaccgatttgtccttggt
gtgttattagacgacgtgttgattcaagcgtcacagcgtttaagcctgatgagcaaaggc
cgttatatcttggctcgtaaaactgaaggcttcaaaggtgcggcagggcgaggcttggat
ttggtagtagaggacagctacacaggtaaaacgcgcgatgttgcgacgttatcaggtggt
gaatctttcatggcagcgttggcattagcgctcggtctatctgatgttgtgcagtcttac
agtggtggtattcgcttggatacgctgtttattgatgaaggttttggcagcttagatccg
gaatcattggatcttgcgattcaaaccttggtcgacttacagcaaacgggtcgcatgatt
ggcgtgatttctcacgtatctgaactgaaagagcaaatggcacagcgtattgatgttgaa
ccatcgcgacttggttctacagtttctgtgaagtctcagatggcatttgattcttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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