KEGG   Vibrio cyclitrophicus: FAZ90_03550
Entry
FAZ90_03550       CDS       T06393                                 
Symbol
ribD
Name
(GenBank) bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase RibD
  KO
K11752  diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]
Organism
vcc  Vibrio cyclitrophicus
Pathway
vcc00740  Riboflavin metabolism
vcc01100  Metabolic pathways
vcc01110  Biosynthesis of secondary metabolites
vcc01240  Biosynthesis of cofactors
vcc02024  Quorum sensing
Module
vcc_M00125  Riboflavin biosynthesis, plants and bacteria, GTP => riboflavin/FMN/FAD
Brite
KEGG Orthology (KO) [BR:vcc00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00740 Riboflavin metabolism
    FAZ90_03550 (ribD)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FAZ90_03550 (ribD)
Enzymes [BR:vcc01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.193  5-amino-6-(5-phosphoribosylamino)uracil reductase
     FAZ90_03550 (ribD)
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.4  In cyclic amidines
    3.5.4.26  diaminohydroxyphosphoribosylaminopyrimidine deaminase
     FAZ90_03550 (ribD)
SSDB
Motif
Pfam: RibD_C dCMP_cyt_deam_1 MafB19-deam Inv-AAD
Other DBs
NCBI-ProteinID: QCI70178
Position
1:729023..730111
AA seq 362 aa
MMSRAIQLAKRGIYTTAPNPNVGCVIVQADGQIVGEGFHAKAGEPHAEVHAMRMAGDKAK
GATAYVTLEPCSHYGRTPPCAEGLIKAQVSKVICAMQDPNPKVAGRGIKMLRDAGIEVEI
GLLEQDALDLNPAFIKRMQTGMPFVQLKMAASLDGQTALENGQSQWITSSEARRDVQNYR
AKSGAVLSTSQTVIEDNASLNVRWTELPSSIKDHYAEDELRQPIRVILDRQNQLYPELKL
FQTPTSVLRVAETSADIEVGTTDAGQLDLHALMRQLPANHIDHIWVEAGATLAKSLIEEQ
LVDELILYLAPKLMGSDGRGLMGALGLTSMSDVIDLEIKDVRQVGVDIRIVAKPRAAKPL
SK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgatgtcgcgcgctattcaattagcgaaacgcggcatttacaccactgcgccaaaccca
aatgtaggctgtgtcatcgtacaagccgatggtcagatcgttggtgaaggttttcatgcc
aaagcgggcgaacctcatgctgaagtgcacgctatgcgaatggcgggtgataaggcaaaa
ggtgcaacggcttacgttacgctagaaccttgttcgcattatggtcgaacgccgccttgt
gcggaaggtttgattaaggctcaagtttcaaaagtgatttgcgccatgcaggacccaaac
cctaaagtcgcagggcgtggcatcaagatgctacgtgatgcgggtattgaggttgagata
ggcttgttagagcaagatgctctcgatttaaatcctgcatttatcaagcgtatgcaaacg
ggcatgccattcgtacagttaaaaatggcggctagcctagatggccaaacggcattggaa
aatggtcaaagccagtggatcacgtcgtcagaagcgcgtcgtgacgttcagaactaccga
gccaaatcaggcgcggtgttatcaaccagccaaacggtgattgaagacaacgcgtcattg
aatgttcgctggactgagttaccaagtagtatcaaagatcattacgctgaagacgagttg
cgtcagccgattcgcgtgattcttgatcgccaaaatcagctgtatcctgagctcaagtta
ttccagactccaacttcggtattgagagttgctgaaacctctgctgatattgaagtcgga
actacagatgcaggtcagctcgatttgcacgctctgatgcgtcaattacctgcgaatcat
atcgaccatatttgggtcgaagcgggcgcgacattggcaaaaagcttgattgaagaacag
ctggtggatgagctaatcctctatttagcacctaaacttatgggcagtgacggacgaggt
ttgatgggtgcattagggctcacttcaatgtctgatgtgattgacctagaaattaaagat
gttcgacaggttggtgtggatattcgtatcgtagctaaaccaagagcggcgaaaccactc
tcgaaatag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (27)   

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