KEGG   Vibrio cyclitrophicus: FAZ90_10910
Entry
FAZ90_10910       CDS       T06393                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K10941  sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
vcc  Vibrio cyclitrophicus
Pathway
vcc02020  Two-component system
vcc02040  Flagellar assembly
vcc05111  Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:vcc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    FAZ90_10910
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   05111 Biofilm formation - Vibrio cholerae
    FAZ90_10910
  09142 Cell motility
   02040 Flagellar assembly
    FAZ90_10910
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vcc03000]
    FAZ90_10910
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:vcc02035]
    FAZ90_10910
Transcription factors [BR:vcc03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    FAZ90_10910
Bacterial motility proteins [BR:vcc02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    FAZ90_10910
SSDB
Motif
Pfam: Sigma54_activat FleQ Sigma54_activ_2 HTH_8 AAA_5 AAA_16 HTH_50 bpMoxR Mg_chelatase AAA AAA_7 nSTAND3
Other DBs
NCBI-ProteinID: QCI71561
Position
1:complement(2414349..2415815)
AA seq 488 aa
MQGLAKLLVVDDNAQDRHNLSTILEFVGESCEVISSEQARKVDWSLQWAGCIIGSIKGKG
FNALLNEKLVHANHIPLLVIGKNNHPVDELTNFVGELELPLNYPQLSDALRHCKDFLGRK
GVQVVSSARKNTLFRSLVGQSASIQEVRHLIEQVSATEANVLILGESGTGKEVVARNIHY
HSKRRTGPFVPVNCGAIPAELLESELFGHEKGAFTGAITARKGRFELAEGGTLFLDEIGD
MPMAMQVKLLRVLQERCFERVGGNNTIQADVRVIAATHRNLEDMIDADSFREDLYYRLNV
FPIEMPALQDRKEDIPLLLQELMTRMEAEGSMPICFTPRAINSLMEHYWPGNVRELANLV
ERMLILYPNSLVDVNHLPTKYRYSDIPEFQPEFNSFVSEEEQERDALADLFSEDFSFDQQ
DELADNANAPQELPPEGVNLKELLADMEVNMINQALEAQGGIVARAADMLGMRRTTLVEK
MRKYNLQR
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgcaaggtttggcaaaactgcttgtcgtcgacgataacgctcaagatcgtcacaattta
agcacaatattagagtttgtaggagagagctgcgaagttatcagctctgaacaagcacgc
aaagtagactggtcacttcagtgggcaggctgcattatcggctcaattaaaggtaaaggc
ttcaacgcattactgaatgaaaagcttgttcatgcgaatcacatcccactgcttgtgatt
ggcaaaaacaatcacccagtagacgagcttactaactttgtcggtgaacttgaacttcct
cttaattatcctcaattgagtgatgcattaagacactgcaaagacttcttaggccgtaaa
ggcgttcaagttgtgtcttcagcgcggaagaacacactgtttcgcagcctagttgggcaa
agcgctagcattcaagaagttcgtcacttaattgagcaagtctctgctacggaagctaac
gtgctgattcttggtgaatcgggtacgggtaaagaagtcgtagcacgtaatattcactat
cattctaagcgtcgtactgggccatttgtgccagtgaattgtggcgcgattccagcagag
ttgctcgaaagtgaactgtttggtcacgagaaaggggcgtttactggtgcaattaccgca
cgtaaaggccgtttcgaactggctgaaggtggcacactatttcttgatgaaattggcgat
atgccaatggcgatgcaagttaagctactacgcgtgttacaagagcgatgctttgagcgt
gtaggcggtaacaataccattcaagcggatgttcgagtgattgcggcaacgcaccgtaat
cttgaggatatgatcgatgccgactctttccgtgaagatctttattatcgtttgaacgta
ttcccaattgaaatgccggctcttcaagatcgcaaagaagatatccctctgttacttcaa
gagctgatgaccagaatggaagcagaaggtagtatgcctatctgttttacgcctcgcgcc
atcaattctttaatggaacactattggccaggtaacgttcgtgagctagcgaacttagtt
gaacgaatgctaattctttatccaaatagcttggttgatgtgaatcacctgccaaccaaa
tatcgatacagcgatattcctgaattccaaccagagtttaatagctttgtgtctgaagaa
gagcaggagcgtgatgcattagccgacttgttctcagaagacttcagctttgatcagcaa
gatgaacttgccgacaatgcaaatgcacctcaagagttaccgccagaaggggttaacttg
aaagagctgctcgctgatatggaagtgaacatgattaatcaagcgttggaggcgcagggc
ggtatcgttgctcgtgcggctgatatgcttggaatgcgtagaacgactttggttgaaaaa
atgcgtaagtataatctacagcgctag

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